Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g236 ATGTGGTCTTTTCTCAGAGCTTTCAAGTCCACTGATCCTGATTCTTTCATCTCCAGCTTTATCACCAGATTTGGACAAACTGGTATGTACAAGGTGTTAATGTTTGGGAACCCTAGCATCATTGTTACTATACCTGAAGCATGCAAAAGAGTCTTAACAGACGATCAAAATTTCAAGCCGGGCTGGCCTACATCCACCATGGAACTGATTGGAAGGAAATCATTTATTGGCATTACTAATGAGGAGCACAAACGGCTCCGCCGGTTAACAGCAACTCCAGTCAATGGGCATGAAGCATTGTCCATTTACATGCAATATATTGAAGACAACGTTATATCTGCCTTGAACAAATGGGCTGCGATGGGAGAATTTGAGTTCTTAACTGCACTCCGAAAGCTTACTTTTAAGATAATTATGTACATATTTCTTAGCTCAGAGAGCGAGCATGTAATGGAAGCTCTGGAGAGGGAATATACTTCACTCAACTATGGAGTTAGGTCCATGGCAATCAATCTCCCGGGTTTTGCTTACCATAAAGCACTCAAGGCTCGGAAAAATCTTGTGAACATTTTTCAATCTATAGTGAATGAGCGAAGGGATAGGAAGAAAGGCAATTCTCAAACAATGAAAAAAGACATGATGGATGCTCTGCTGGACATCGAAGATGAAAATGGAAGAAAATTGAGTGATGAGGAAATCATAGACATTCTTGTAATGTACTTGAATGCCGGTCATGAATCTTCTGCTCACGTCACGATGTGGGCTACTGTCAAGCTACAAGAAAACCCTGAATTTTTCCAAAGAGCCAAGGCAGAGCAAGAGGAGATCATAAGGAAGAGACCACCTAACCAGAAGAGATTGACGCTCAAGGAAATTCGAGAAATGGAGTATCTTCCCAAGGTGATCGATGAAACGCTTCGTTGGATTACATTCTCATTTGTGGTATTCCGAGAGGCAAAAGCAGACATCAATATATGTGGTTATACTATTCCCAAGGGATGGAAGGTTCTGGTTTGGTTTAGATCCCTTCACTTTGACCCTGAAACATATCCAGACCCAAAGGAGTTTAATCCTTGCAGATGGGATGATTATACAGCAAAACCAGGAACTTTCCTTCCCTTTGGATTAGGCAGCAGGCTGTGCCCTGGCAATGATCTTGCCAAGCTTGAAATTTCTGTTTTCCTACACCACTTTCTCCTTAATTATCAGCTGGAACGGCTGAATCCTGGGTGCCCGCGCATGTACTTACCACACTCAAGGCCCAGAGACAATTGCTTGGCAATAGTCCGAAAAGTAGCAGCTGAATCAGAATAA 1314 42.39 MWSFLRAFKSTDPDSFISSFITRFGQTGMYKVLMFGNPSIIVTIPEACKRVLTDDQNFKPGWPTSTMELIGRKSFIGITNEEHKRLRRLTATPVNGHEALSIYMQYIEDNVISALNKWAAMGEFEFLTALRKLTFKIIMYIFLSSESEHVMEALEREYTSLNYGVRSMAINLPGFAYHKALKARKNLVNIFQSIVNERRDRKKGNSQTMKKDMMDALLDIEDENGRKLSDEEIIDILVMYLNAGHESSAHVTMWATVKLQENPEFFQRAKAEQEEIIRKRPPNQKRLTLKEIREMEYLPKVIDETLRWITFSFVVFREAKADINICGYTIPKGWKVLVWFRSLHFDPETYPDPKEFNPCRWDDYTAKPGTFLPFGLGSRLCPGNDLAKLEISVFLHHFLLNYQLERLNPGCPRMYLPHSRPRDNCLAIVRKVAAESE* 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9763051 9768588 - Vvi15g236 Vvi15g236 776928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g236 437 PANTHER ENT-KAURENOIC ACID OXIDASE 2 1 429 - -
Vvi15g236 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 374 383 IPR017972 GO:0005506|GO:0016705
Vvi15g236 437 SUPERFAMILY Cytochrome P450 7 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 Pfam Cytochrome P450 15 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS E-class P450 group I signature 232 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS E-class P450 group I signature 252 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS E-class P450 group I signature 339 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS E-class P450 group I signature 381 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PANTHER CYTOCHROME P450 26 1 429 - -
Vvi15g236 437 PRINTS P450 superfamily signature 243 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS P450 superfamily signature 372 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g236 437 Gene3D Cytochrome P450 2 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g236 K04123 - vvi:100251295 892.493