Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g270 ATGCTGCGCCAAGCCACACGCCTCCTGGCTCGACCTGCCATCGCCTCCTCCTCCTCCTTCGCCGCCAGGGCTCGCTCCTTCTCCACCGATCTCCCCACCGCTCCGGCTGAAGATTCCACCTTCATCGATGCCTGGAAGAAAATCATTCCAAATATTGACCCACCCGCAACCCCTCTCACTTTCATGCAACCTCGACCACAGACTCCCTCTTCCATTCCTTCTAAGCTCACGGTCAACTTCGTTCTTCCTTATGCCTCTGAGCTCTCCGCCAAGGAGGTTGACATGGTTATTATACCGGCAACTACTGGACAGATGGGTGTTCTCCCTGGACATGTAGCCACAATTGCAGAGCTGAAACCTGGGGTCATGTCAGTGCATGAAGGAAATGATGTGACAAAGTATTTCATTAGCAGCGGCTTTGCAGTCATCCATGCTAACTCCTTTGCAGATATAATTGCCATTGAGGCTGTGCCTATTGATCAAATTGACCCAAGCTTGGTTCAGAAGGGGCTTGCTGACTTCACGCAGAAGCTGAGCTCAGCATCAACGGACTTGGAGAAAGCTGAGGCCCAAATTGGAGTGGATGTGCATAGTGCTCTTAACTCTGCTCTCACGGGCTAG 621 52.17 MLRQATRLLARPAIASSSSFAARARSFSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPLTFMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG* 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10798617 10802774 + Vvi15g270 Vvi15g270 776962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g270 206 Gene3D - 65 162 IPR036771 -
Vvi15g270 206 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 76 147 IPR020546 GO:0015986
Vvi15g270 206 Hamap ATP synthase epsilon chain [atpC]. 74 194 IPR001469 GO:0015986|GO:0045261|GO:0046933
Vvi15g270 206 CDD F1-ATPase_delta 76 199 IPR001469 GO:0015986|GO:0045261|GO:0046933
Vvi15g270 206 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 206 - -
Vvi15g270 206 Coils Coil 171 191 - -
Vvi15g270 206 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 76 157 IPR036771 -
Vvi15g270 206 Gene3D - 163 205 - -
Vvi15g270 206 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 206 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g270 K02134 - vvi:100242707 393.275