Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g276 | ATGTCCATAGCAGCAATTAAAGAATTTTACAGTGCCAAAGATGAGAATGAAGTTGCTTTGTGCATCAAAGATCTAAATTCCCCAGGCTTCTACCCATCTATGGTGTCTATTTGGGTTACAGACTCTTTTGAGAGGAAAGACAAAGAAATGGACATGCTGGCTAAGCTTCTTGTCAATCTAACAAAATCTCGGGATGCCATGTTAAGTCAAGTTCAACTAATCAAAGGATTTGAAGCTGTACTGACTGCTTTGGAGGATGCTGTAAATGATGCCCCAAAAGCAGCAGAATTTCTTGGTCGCATCTTTGCCATGGTTATCATAGAGAATGTGATTCCCTTAAGGGAGTTAGGGCAGATAATACTTGAAGGTGGAGAAGAGCCTGGTCGGCTGCGAGAAATCGGGCTTGCGGCTGAAGTTCTGGGGAGCACATTGGAGATTATCAAATCAGAGAAAGGGGAGAATGTGTTGAACGAGATTCGCAAAGTGTCCAATTTGCGGTTGGATGACTTCCGGCCTCCTGATCCTTCTTACAGATCAGCAAAATTAGATAAATTTATTTAG | 561 | 42.25 | MSIAAIKEFYSAKDENEVALCIKDLNSPGFYPSMVSIWVTDSFERKDKEMDMLAKLLVNLTKSRDAMLSQVQLIKGFEAVLTALEDAVNDAPKAAEFLGRIFAMVIIENVIPLRELGQIILEGGEEPGRLREIGLAAEVLGSTLEIIKSEKGENVLNEIRKVSNLRLDDFRPPDPSYRSAKLDKFI* | 187 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 10933761 | 10942754 | + | Vvi15g276 | Vvi15g276 | 776968 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g276 | 186 | Pfam | MA3 domain | 5 | 112 | IPR003891 | - | |
Vvi15g276 | 186 | SUPERFAMILY | ARM repeat | 2 | 175 | IPR016024 | - | |
Vvi15g276 | 186 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 2 | 166 | IPR045208 | GO:0003743 | |
Vvi15g276 | 186 | ProSiteProfiles | MI domain profile. | 1 | 121 | IPR003891 | - | |
Vvi15g276 | 186 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4G | 2 | 166 | - | - | |
Vvi15g276 | 186 | SMART | ma3_7 | 2 | 112 | IPR003891 | - | |
Vvi15g276 | 186 | Gene3D | - | 1 | 186 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g276 | K03260 | - | vvi:100261523 | 341.658 |