Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g276 ATGTCCATAGCAGCAATTAAAGAATTTTACAGTGCCAAAGATGAGAATGAAGTTGCTTTGTGCATCAAAGATCTAAATTCCCCAGGCTTCTACCCATCTATGGTGTCTATTTGGGTTACAGACTCTTTTGAGAGGAAAGACAAAGAAATGGACATGCTGGCTAAGCTTCTTGTCAATCTAACAAAATCTCGGGATGCCATGTTAAGTCAAGTTCAACTAATCAAAGGATTTGAAGCTGTACTGACTGCTTTGGAGGATGCTGTAAATGATGCCCCAAAAGCAGCAGAATTTCTTGGTCGCATCTTTGCCATGGTTATCATAGAGAATGTGATTCCCTTAAGGGAGTTAGGGCAGATAATACTTGAAGGTGGAGAAGAGCCTGGTCGGCTGCGAGAAATCGGGCTTGCGGCTGAAGTTCTGGGGAGCACATTGGAGATTATCAAATCAGAGAAAGGGGAGAATGTGTTGAACGAGATTCGCAAAGTGTCCAATTTGCGGTTGGATGACTTCCGGCCTCCTGATCCTTCTTACAGATCAGCAAAATTAGATAAATTTATTTAG 561 42.25 MSIAAIKEFYSAKDENEVALCIKDLNSPGFYPSMVSIWVTDSFERKDKEMDMLAKLLVNLTKSRDAMLSQVQLIKGFEAVLTALEDAVNDAPKAAEFLGRIFAMVIIENVIPLRELGQIILEGGEEPGRLREIGLAAEVLGSTLEIIKSEKGENVLNEIRKVSNLRLDDFRPPDPSYRSAKLDKFI* 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10933761 10942754 + Vvi15g276 Vvi15g276 776968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g276 186 Pfam MA3 domain 5 112 IPR003891 -
Vvi15g276 186 SUPERFAMILY ARM repeat 2 175 IPR016024 -
Vvi15g276 186 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 2 166 IPR045208 GO:0003743
Vvi15g276 186 ProSiteProfiles MI domain profile. 1 121 IPR003891 -
Vvi15g276 186 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G 2 166 - -
Vvi15g276 186 SMART ma3_7 2 112 IPR003891 -
Vvi15g276 186 Gene3D - 1 186 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g276 K03260 - vvi:100261523 341.658