Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g325 | ATGGATGAGAAGTCGATTGCCCTCGACGAGGCTATAAACAAGGAAGCTGTTGATCTGGAGAATATACCCCTTGAAGAAGTTTTTGAACATCTTAAATGTACTAGAGAGGGTCTCAGCCATGAAGCGTTTCAACAACGGTTGGATCTGTTTGGGTACAATAAACTTGAAGAAATAAAGGAAAACAAAATACTGAAGTTTTTGGGATTTATGTGGAATCCTCTGTCATGGGTCATGGAAGCAGCAGCTGTAATGGCTATTGCTCTTGCACATGGAGGAGGCAAGCCTACAGATTATCATGATTTTGTTGGGATCATCATCTTACTTATTGTCAATTCTACAATCAGTTTCGTAGAGGAAAACAATGCAGGAAATGCAGCAGCTGCTCTTATGGCTCGGTTGGCCCCAAAAGCAAAGGTCTTACGTGATGGGAAATGGAGTGAGGAAGATGCAGCAGTGTTGGTTCCTGGAGACATAATCAGTATCAAACTTGGGGACATCATTCCTGCAGATGCACGTCTTCTTGAAGGAGATCCCCTAAAGATTGATCAGTCTGCCCTAACTGGAGAATCGCTTCCTGTAACCAAGAATCCTGGTGATGGAGTCTACTCAGGTTCAACATGTAAGCAAGGTGAAATTGAAGCAGTAGTTATTGCAACTGGAGTTCATACTTTCTTTGGGAAGGCAGCCCACCTTGTGGAAACCACTACACATGTTGGCCATTTTCAAAAGGTTTTAACAGCAATCGGAAACTTCTGCATTTGCTCAATTGCTTTTGGGATGGCTATTGAAATCGTAGTGATATATGGGCTTCAGGAGAGGGAATATCGTGTTGGTATCGATAACCTGCTTGTTCTACTGATTGGTGGGATCCCAATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCTATAGGTTCTCATCGGTTATCTCAGCAGGGTGCTATAACGAAGCGAATGACTGCCATTGAGGAAATGGCTGGAATGGATGTGCTATGCAGTGACAAAACAGGCACCTTGACACTTAACAAACTCACTGTGGACAAGAATATGATCGAGGTTTTTGCCAAAGGGGTTGACAAGGATATGGTTGTACTCATGGCTGCAAGGGCATCAAGATTAGAAAACCAAGATGCCATTGATGCCGCAATTGTTTCAATGTTAGCAGACCCTAAAGAGGCACGAGCTGGGATAACGGAAATTCACTTCCTCCCATTCAATCCAACCGATAAAAGGACGGCGCTTACATACATAGATGGTGCTGGTAAAATGCATAGAGTGAGCAAAGGTGCACCAGAGCAGATTCTCAATCTAGCTCATAACAAATCAGAAATTGAGAGGAAGGTACATTCAATAATTGACAAGTTTGCAGAACGTGGCCTTCGATCCCTAGGTGTTGCCCGCCAGGAAGTACCTGCTGGAAACAAAGAGAGTTCTGGTGCCCCATGGGAATTTGTTGGTCTCCTCCCTCTCTTTGATCCTCCTCGCCATGATAGTGCTGAAACAATAAGAAGAGCACTTGATCTTGGAGTTAGTGTCAAAATGATCACAGGTGACCAACTGGCAATTGGTAAGGAAACAGGAAGACGACTTGGAATGGGCACAAACATGTATCCCTCTTCATCTTTGCTTGGTGAAAATAAGGATGAGGCAGTTTCAGCTCTACCAATTGATGACCTCATTGAGAAAGCTGATGGTTTTGCTGGGGTTTTTCCTGAACATAAATATGAGATTGTAAAGAGATTACAAGCAAGAAATCACATCTGTGGAATGACTGGGGATGGAGTAAATGATGCACCTGCATTAAAGAAAGCTGATATAGGAATTGCTGTAGCAGATTCCACTGATGCTGCTCGTGGTGCTTCTGATATAGTTCTAACAGAGCCTGGTTTGAGTGTCATCATCAGTGCCGTCTTAACAAGCCGCGCAATCTTCCAGCGGATGAAAAACTACACGATATATGCTGTCTCTATTACCATACGTATTGTGCTAGGTTTTATGTTGCTGACTTGCTTCTGGGAATTTGACTTCCCTCCTTTTATGGTTCTCGTCATTGCCATTCTTAATGATGGTACCATAATGACAATATCCAAAGACAGGGTCAAGCCTTCTCCACTTCCTGATAGTTGGAAGCTCACTGAAATTTTTACAACTGGGGTTGTTCTTGGAGCTTACCTGGCCCTAATGACAGTTTTTTTCTTCTATGTAACCTATGAAACTAACTTCTTTACGCACCACTTTAACATGACAAATGAAACCATAGCTATTGAGCTTAAAGAACAGTTGGCATCTGCTGTTTATCTTCAAGTCAGCACCATCAGCCAGGCCTTGATATTTGTCACTCGCTCTAGGAACTGGTCATTCACAGAACGACCTGGACTTCTGCTCGTAACAGCCTTTATTATTGCTCAACTGATTGCTACTGTGATATCTGCTACTGCAACCTGGAAATTTGCGGGAATTAGAAAGATTGGGTGGGGTTGGACTGCTATCATTTGGGTGTATAATATTCTGACTTACCTTTTGCTTGATCCAATCAAGTTTGCTGTCCGGTATGCCCTCAGCGGACGAGCCTGGGGTCTGGTGGTAAACCAAAGGACCGCATTCACAAACCAGAAGGACTTTGGCAAGGAAGCCCGTGAGGCTAAATGGGCTGCTGAGCAGCGAACGCTGCATGGCCTACAGTCTGCTGAGATGGCAAGCATGTTCTCGCAGCGCGGCACTTTTAGGGACATTAACCTTATGGCAGAAGAAGCAAGAAGGAGGGCTGAAATCTCAAGGTTGAGAGAGCTTCGCACTCTGAAAGGAAGGGTTGAGTCCTTTGCCAAGCTGAGGGGTCTAGACATTGATTCCAACATCAATCCGCACTACACTGTCTAA | 2877 | 44.04 | MDEKSIALDEAINKEAVDLENIPLEEVFEHLKCTREGLSHEAFQQRLDLFGYNKLEEIKENKILKFLGFMWNPLSWVMEAAAVMAIALAHGGGKPTDYHDFVGIIILLIVNSTISFVEENNAGNAAAALMARLAPKAKVLRDGKWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVETTTHVGHFQKVLTAIGNFCICSIAFGMAIEIVVIYGLQEREYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIEVFAKGVDKDMVVLMAARASRLENQDAIDAAIVSMLADPKEARAGITEIHFLPFNPTDKRTALTYIDGAGKMHRVSKGAPEQILNLAHNKSEIERKVHSIIDKFAERGLRSLGVARQEVPAGNKESSGAPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDEAVSALPIDDLIEKADGFAGVFPEHKYEIVKRLQARNHICGMTGDGVNDAPALKKADIGIAVADSTDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLTEIFTTGVVLGAYLALMTVFFFYVTYETNFFTHHFNMTNETIAIELKEQLASAVYLQVSTISQALIFVTRSRNWSFTERPGLLLVTAFIIAQLIATVISATATWKFAGIRKIGWGWTAIIWVYNILTYLLLDPIKFAVRYALSGRAWGLVVNQRTAFTNQKDFGKEAREAKWAAEQRTLHGLQSAEMASMFSQRGTFRDINLMAEEARRRAEISRLRELRTLKGRVESFAKLRGLDIDSNINPHYTV* | 959 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 12288191 | 12296641 | + | Vvi15g325 | Vvi15g325 | 777017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g325 | 958 | SFLD | C1.7: P-type atpase like | 314 | 642 | - | - | |
Vvi15g325 | 958 | SUPERFAMILY | Calcium ATPase, transduction domain A | 135 | 232 | IPR008250 | - | |
Vvi15g325 | 958 | Pfam | E1-E2 ATPase | 133 | 311 | - | - | |
Vvi15g325 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 182 | 196 | - | - | |
Vvi15g325 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 332 | 346 | - | - | |
Vvi15g325 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 486 | 497 | - | - | |
Vvi15g325 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 508 | 518 | - | - | |
Vvi15g325 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 591 | 610 | - | - | |
Vvi15g325 | 958 | PRINTS | P-type cation-transporting ATPase superfamily signature | 614 | 626 | - | - | |
Vvi15g325 | 958 | Gene3D | - | 906 | 958 | - | - | |
Vvi15g325 | 958 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 104 | 352 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 566 | 670 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | Gene3D | - | 135 | 219 | - | - | |
Vvi15g325 | 958 | SFLD | p-type atpase | 314 | 642 | IPR044492 | - | |
Vvi15g325 | 958 | SMART | Cation_ATPase_N_a_2 | 18 | 90 | IPR004014 | - | |
Vvi15g325 | 958 | Gene3D | - | 329 | 628 | IPR023214 | - | |
Vvi15g325 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 448 | 466 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 563 | 579 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 591 | 607 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 622 | 647 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | PRINTS | H+-transporting ATPase (proton pump) signature | 766 | 787 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi15g325 | 958 | Gene3D | - | 344 | 491 | IPR023299 | GO:0000166 | |
Vvi15g325 | 958 | Pfam | haloacid dehalogenase-like hydrolase | 328 | 605 | - | - | |
Vvi15g325 | 958 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 18 | 853 | IPR023298 | - | |
Vvi15g325 | 958 | CDD | P-type_ATPase_H | 37 | 847 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Vvi15g325 | 958 | Gene3D | - | 97 | 821 | - | - | |
Vvi15g325 | 958 | Pfam | Cation transporter/ATPase, N-terminus | 21 | 84 | IPR004014 | - | |
Vvi15g325 | 958 | SUPERFAMILY | HAD-like | 328 | 638 | IPR036412 | - | |
Vvi15g325 | 958 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 334 | 340 | IPR018303 | - | |
Vvi15g325 | 958 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 37 | 811 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Vvi15g325 | 958 | PANTHER | PLASMA MEMBRANE ATPASE | 4 | 937 | - | - | |
Vvi15g325 | 958 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 4 | 937 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g325 | K01535 | - | vvi:100246249 | 1824.29 |