Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi15g443	ATGTCCTCCTCATCTGCCTTTTCACCGGACCACCTCTCCCCCACCTCCGACCAGCTCTGTTACGTCCATTGCAACTTTTGTGACACTGTCCTCGCGGTGAGCGTTCCTTGCACTAGTTTGTTCAAGACTGTTACGGTTCGATGCGGTCACTGCACCAACCTCTTGTCCGTCAACATGCGTGGACTGCTTCTTCCTGCTGCTAATCAGCTTCACCTGGGACACTCTCTCTTCTCTCCTCATAATATTCTGGAGGAGATCCGCAGCCCACCGTCCAGTATGTTAATCAATCAGCCCAACCCGAATGAGGCGGTCATGCCGGTGCGAGGAGTCGATGAGATACCGAAACCCCCAGTAGTTAACAGACCCCCGGAGAAGAGACAGAGAGTCCCATCTGCTTACAACCGATTCATCAAGGACGAGATCCAACGTATCAAAGCTGGAAATCCAGGCATAAGTCACAGAGAGGCCTTTAGTGCTGCTGCAAAGAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCTGATCAACCCGTGAAGAAAGCTAACGTGCGCCAACAGGAAGGAGAGGACATGCTCATGAAAGATGGTTTCTTTGCTCCTGCCAATGTGGGTGTCTCCCCCTACTAA	633	51.82	MSSSSAFSPDHLSPTSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHSLFSPHNILEEIRSPPSSMLINQPNPNEAVMPVRGVDEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPGISHREAFSAAAKNWAHFPHIHFGLMPDQPVKKANVRQQEGEDMLMKDGFFAPANVGVSPY*	211

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
15	14674817	14677943	+	Vvi15g443	Vvi15g443	777135

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi15g443	210	Pfam	YABBY protein	15	174	IPR006780	GO:0007275
	Vvi15g443	210	PANTHER	PROTEIN YABBY 4	1	208	-	-
	Vvi15g443	210	Gene3D	High mobility group box domain	115	171	IPR036910	-
	Vvi15g443	210	PANTHER	PROTEIN YABBY 6-RELATED	1	208	IPR006780	GO:0007275
	Vvi15g443	210	SUPERFAMILY	HMG-box	117	167	IPR036910	-

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	14062	PF04690	YABBY	3.70E-72	CL0114	Vvi	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi15g443	K25796		-	vvi:100243667	438.343