Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g462 | ATGGATCCAGTTACAGCCCATGGTCGTCCTCTTCCTCCTCCTTTCCACACCAGAGATCTTCAGCTGCACCACCACCACCAATATCAACACCACCCACAAGCCAATTCTGAAGATGAACAAAGTGGCAGCAGCAGCTTAAACCGAGCACAGAAGCGTGATCGCGATGAAAGTAACGCCACCAACAACACTAGTCCGATTGACGGCAAAGAATTCGGCACATCCAGTGGCGATGGAGAGATCACGAGAAGACCTAGAGGCAGACCAGCTGGCTCCAAGAACAAGCCCAAACCTCCCATCATTATAACACGAGACAGTGCCAACGCCCTCCGATCCCATGTCATGGAAATTGCCACCGGATGCGATATCATGGACAGTCTAAACACCTTTGCTCGGCGGCGACAGAGGGGGATTTGCATTTTAAGCGGCAGCGGAACTGTGACCAATGTCACTCTAAGGCAACCCGCTTCCCCCGGTGCAGTTGTGACCTTACACGGAAGATTTGAGATCTTATCGCTCTCCGGCTCTTTTCTACCCCCTCCAGCACCGCCCGCTGCGTCGGGGCTAACCATATACCTGGCCGGCGGACAGGGGCAGGTGGTGGGTGGTAGCGTGGTTGGGCCGCTACTAGCCTCGGGTCCAGTGGTAATCATGGCTGCTTCATTTGGTAATGCCGCATACGAGAGGCTTCCTCTGGAGGATGAAGAGCCGCAGGTTCCGATTCCCGGAAGCGGCCCTCTTGGATCTCCGGGAATGGTGGGACAACAGCCGCAACAGCAGCAGCAGCAGCAACAGCTTTTGCCAGATCCTAACGCATCTCTTTTTCAAGGGTTACCTCCAAATCTTCTCAATTCATGCCAATTACCTGCTGAGGCCTATTGGGGAACTGCTCGCCCACCCTATTAG | 903 | 54.49 | MDPVTAHGRPLPPPFHTRDLQLHHHHQYQHHPQANSEDEQSGSSSLNRAQKRDRDESNATNNTSPIDGKEFGTSSGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIATGCDIMDSLNTFARRRQRGICILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEEPQVPIPGSGPLGSPGMVGQQPQQQQQQQQLLPDPNASLFQGLPPNLLNSCQLPAEAYWGTARPPY* | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 14939019 | 14940681 | - | Vvi15g462 | Vvi15g462 | 777154 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g462 | 300 | PIRSF | ESCAROLA | 16 | 300 | IPR014476 | GO:0003680 | |
Vvi15g462 | 300 | MobiDBLite | consensus disorder prediction | 234 | 273 | - | - | |
Vvi15g462 | 300 | MobiDBLite | consensus disorder prediction | 250 | 273 | - | - | |
Vvi15g462 | 300 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 106 | 240 | - | - | |
Vvi15g462 | 300 | MobiDBLite | consensus disorder prediction | 1 | 101 | - | - | |
Vvi15g462 | 300 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 110 | 222 | IPR005175 | - | |
Vvi15g462 | 300 | ProSiteProfiles | PPC domain profile profile. | 106 | 244 | IPR005175 | - | |
Vvi15g462 | 300 | CDD | DUF296 | 110 | 177 | IPR005175 | - | |
Vvi15g462 | 300 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 4 | 300 | IPR014476 | GO:0003680 | |
Vvi15g462 | 300 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 | 4 | 300 | - | - | |
Vvi15g462 | 300 | Gene3D | - | 109 | 237 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g462 | - | - | vvi:100245513 | 541.576 |