Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi15g467	ATGACTGGAAGCAAGGGAGATGGTGGTGGGCCATGCGGTGCCTGCAAGTTTCTTCGGAGAAAGTGCGTGAAAGGCTGTGTTTTTGCTCCTTACTTTGACTCCGACCAGGGCACCGCCCACTTCGCGGCCGTGCACAAGGTGTTTGGTGCCAGCAACGCTTCCAAGCTTCTTACCGGGATTCCCGCTCACAAGCGGCTCGACGCGGTGGTTACTCTCTGCTACGAGGCTCTGGCTAGGCTTAGAGACCCTGTCTATGGCTGTGTTGCTCATGTTTTCACTCTCCAACAACAGGTTATGAATTTGCAGGCGGAGTTGGCCTTCATTCAGGCCCGTCTTTCGACCTTGCAGCGCATTCCTTCTCTGGCACCGCCACCCCTACTGCCTGAAAGTGCACCGCAGCCCAATCTTCAGTCTGACTTTTTTAATGTTCCTCTACAATCACACGAGGCGTCGATGGAAGCTGCGGACTTCTGTAATAATTCAATGGACAGAGAGCTCGAGGATGGTGATCTCCAAACCCTAGCTCAAGAATTTGTCTCTAGATTCTTGCCCGGAGTAAAAGTCCGGGATTCGAGTTCTAACTAA	585	52.65	MTGSKGDGGGPCGACKFLRRKCVKGCVFAPYFDSDQGTAHFAAVHKVFGASNASKLLTGIPAHKRLDAVVTLCYEALARLRDPVYGCVAHVFTLQQQVMNLQAELAFIQARLSTLQRIPSLAPPPLLPESAPQPNLQSDFFNVPLQSHEASMEAADFCNNSMDRELEDGDLQTLAQEFVSRFLPGVKVRDSSSN*	195

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
15	14992323	14994786	+	Vvi15g467	Vvi15g467	777159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi15g467	194	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 19	5	184	-	-
	Vvi15g467	194	ProSiteProfiles	LOB domain profile.	10	112	IPR004883	-
	Vvi15g467	194	Coils	Coil	91	118	-	-
	Vvi15g467	194	PANTHER	LOB DOMAIN CONTAINING PROTEIN	5	184	-	-
	Vvi15g467	194	Pfam	Lateral organ boundaries (LOB) domain	11	109	IPR004883	-

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	14065	PF03195	LOB	7.70E-37	No_clan	Vvi	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi15g467	-		-	vvi:100248994	379.793