Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g491 ATGTATACATTACATTTGAAAATGTGGGAAAAGTTTACATCACTACAAAATAAGTACATCCCAACTAGGTTGGCATCCACTTATTTATCAATCATTTTGACTAATTCACTTGACATAATGTCCCTACTAATACATATTCTCCTCTTTCAAACAGGCACCACAATGTTTCGAACATCATTTTTGTTGTTGGCTTTCATGGCTGCCGCAACTTCAATTGCTTCAACTGACAAACAGACGTATGTAGTTCACATGGACAAGGCCAAGATCACAGCTTTACGCCTTGCTCTTGGCGATTCCAAGAAATGGTATGAAGCAGTTGTTGATTCCATCATTGAACTCTCAACTCAAGATGAAGAAGAAGAAACATCTCCTCCTCAGCTCCTATACACTTATGAAACTGCCATGACCGGCTTTGCCGCAAAGCTCTCCATCAAGCAGTTGCAAGCCTTGGACAAAGTTGAGGGGTTTCTATCAGCTGTCCCTGATGAATTACTAAGTCTCCACACCACACACTCACCTCAGTTTCTTGGCCTGCACAAGGGGAAAGGACTGTGGAGTACTCACAACTTGGCTACTGACGTTATAATTGGCATCATTGATAGTGGAATCTGGCCTGAACACGTTAGTTTCCATGACTGGGGCATGTCACCTGTGCCCTCTAAATGGAAGGGCTATGAGGCCAGAGCCGGGAGAATCAATGAAACAGTGGATTACCGATCTGCTAGGGACTCCCAAGGTCATGGGACACACACTGCATCAACTGCAGCTGGTGATATGGTAGCTGGAGCTAGCATTTTTGGCATGGCCAAGGGCTCTGCCAGTGGAATGATGTATACATCAAGAATAGCTGCCTACAAAGTTTGTTATATTCAAGCTTCTTTCGGGGCAGTTCAAAACGGACGTACTATTCAATATAGTCTCTGGGACATCAATGTCTTGCCCTCATCCACCCCATTCGCTTGTGGTTCAGGTCATGTCAATCCGGAGAAAGCCTCTGATCCAGGGCTAATTTATGACATTACAACCGACGACTATCTCAACCACTTGTGTAGCCTTAACTACACCTCTTCTCAGATAGCTCTAGTGTCAAGGGGGATCATACTTTTCAATGGCAATGCCCAAAACAACAGTGCCACATACAAAAGAACTGTAACAAATGTTGGGCAACCTACTAGTACTTATGTGGCGCAGGTACAGGAGCCTGATGGAGTATCAGTCATGGTTGAGCCTAGTGTCTTAAAGTTCAGAAAATTCAATCAGAGACTGAGTTATAAGGTGAGCTTTGTTGCCATGGGAGCAGCATCAGCTTCAGTACCAAGTTCATCTTTCGGATCTCTTGTTTGGGTGTCTAAGAAGCATAGGGTTAGAAGTCCTATTGCAATAACTTGGCAAAGTAAAGATAAAGGTGTGTTTTACTAG 1419 43.69 MYTLHLKMWEKFTSLQNKYIPTRLASTYLSIILTNSLDIMSLLIHILLFQTGTTMFRTSFLLLAFMAAATSIASTDKQTYVVHMDKAKITALRLALGDSKKWYEAVVDSIIELSTQDEEEETSPPQLLYTYETAMTGFAAKLSIKQLQALDKVEGFLSAVPDELLSLHTTHSPQFLGLHKGKGLWSTHNLATDVIIGIIDSGIWPEHVSFHDWGMSPVPSKWKGYEARAGRINETVDYRSARDSQGHGTHTASTAAGDMVAGASIFGMAKGSASGMMYTSRIAAYKVCYIQASFGAVQNGRTIQYSLWDINVLPSSTPFACGSGHVNPEKASDPGLIYDITTDDYLNHLCSLNYTSSQIALVSRGIILFNGNAQNNSATYKRTVTNVGQPTSTYVAQVQEPDGVSVMVEPSVLKFRKFNQRLSYKVSFVAMGAASASVPSSSFGSLVWVSKKHRVRSPIAITWQSKDKGVFY* 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15244252 15252325 + Vvi15g491 Vvi15g491 777183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g491 472 Pfam Peptidase inhibitor I9 79 168 IPR010259 -
Vvi15g491 472 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 313 464 - -
Vvi15g491 472 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 69 292 - -
Vvi15g491 472 Gene3D Peptidase S8/S53 domain 169 307 IPR036852 GO:0004252|GO:0006508
Vvi15g491 472 SUPERFAMILY Subtilisin-like 53 287 IPR036852 GO:0004252|GO:0006508
Vvi15g491 472 Gene3D - 350 465 - -
Vvi15g491 472 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 64 168 IPR037045 -
Vvi15g491 472 Pfam Fibronectin type-III domain 371 461 IPR041469 -
Vvi15g491 472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 313 464 IPR045051 -
Vvi15g491 472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 292 IPR045051 -
Vvi15g491 472 Pfam Subtilase family 193 306 IPR000209 GO:0006508|GO:0008236
Vvi15g491 472 PRINTS Subtilisin serine protease family (S8) signature 191 210 IPR015500 -
Vvi15g491 472 PRINTS Subtilisin serine protease family (S8) signature 243 256 IPR015500 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g491 Vvi16g533 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g491 - - vvi:100262514 461.455