Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g494 | ATGTACCCATCAGTTCCAAGTCCTTCGTTACCACCTTCTTCAGCCCACCATTCAGGGCCTTTAGAGTATTATCACCCTCCGCCACCTCAGTCAGCTCCAATTCCCTATCCATACCCTTATCCAGTTTCGCCAATGCCCCTTAGTTCTCCTCAGCCAAGCCTTCAACAGCATAGTAGTTTCCAATATGGGTCATCCCATTACCACTACCAACAACCTGAGTCATACCCACCTAGTGAAACCTATTCTCATGCGCCTGGCCGGGCCAATAGCTTCTCTAGTCATAGTTCGGGGTCTTTTGGAATGGGATCATCACCGAATCATGAAGTTGTTCATGATTCCTCACCTTTATACCCTCCTATTTATCCCCAGTTGGACGATCATTTAAGCAATCTGCATTTGTCTGATAATCATGCATCTGCCCCTGCTTCTCCCTCAGCGCCTTCAGTGCGGGATTCTCCTCCAAGGTATCCGAGTTTGAGTGGAAGTAACTCATTTTCCAGTGGTTGGGAGTCGTACTCAGGTAGGCAGGATTCCTCTCTTCATTCTGCCTATTACCATTCAAGCTCGTTTAATGGCTCGCAGCATAGTCAGAATTTGCAGATTGTGCCCTCTAAAGGGTCCTTGAAGGTTCTGCTTTTACATGGGAATTTAGATATTTGTGTTAATGAAGCAAAAAACCTTCCAAACATGGACATGTTTCATAAAACTTTAGGAGATATCACTAGTGATCCATACGTCTCAATTTCAGTATCAGGTGCTGTAATTGGAAGGACTTTTGTAATTAGTAACAGTGAAAATCCCATCTGGAAGCAAAAATTCTATGTTCCTGTTGCACATCATGCTGCTGAGGTACACTTTATGGTAAAAGATAATTATCTTGGTGTTCCTGGAACATATTTTCCACTGAGAAGAGGTGGAACAGTTACTCTTTACCAAGACGCCCATGTTCCTGATGGGTGCCTTCCAAGCCCAATGCTTGCTCAGGGGACGCCTTACGTACATGGAAAGTGTTGGCATGACATCTTTGATGCAATATGTCAGGCCCAGCGTCTGATTTACATCACAGGTTGGTCTGTGTGGGACAAAGTTAGACTGGTTCGGGATGCTAGTTCTGCAGCAGAGTACACCCTTGGGGAACTTCTGAAATCGAAGTCACAGGAAGGGGTGAGGGTACTGCTTCTTTTATGGGATGATCCTACTTCAAGGAACATTTTGGGTTATAAAACAGATGGAATCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAGCACTCCTCAGTGCAAGTGCTACTTTGTCCCCGCTTTGCTGGAAAACGACATAGTTGGATCAAGCAGAGGGAAGTTGAAACAATCTATACTCACCATCAAAAAACTGTTATCCTGGATGCTGATGCTGGTTGTAATAGAAGGAAAATCATAGCTTTTGTTGGAGGACTTGATCTATGTGATGGGCGATATGATACTCCTCATCATCCTCTATTTAGGTCACTGGAAAAGGAGCATAAAGATGACTATCATAACCCAACTTTCACGGGGAATGTTGCTGGTTGTCCCAGAGAACCATGGCATGACATGCACTGTAAAATAGATGGTCCCGCAGCATATGACGTTCTGACCAACTTTCAGGAGCGCTGGTTAAAAGCTGCTAAACCCCATGGGATAAAAAAATTGAAGATGTCCTATGATGATGCTCTGCTCAAGATAGAAAGAATTCCTGACATCCTTGGGATTTCTGATGCTCCTTGCCTTGGTGAGAATGATCCTGAGGCTTGGCATGTTCAGGTTTTTCGCTCAATTGATTCAAATTCTGTTAAGGGCTTTCCGAAGGACTCAAGGGATGCTTTACAAAAGAACCTGGTATGTGGGAAGAATGTATTGATTGACATGAGCATACATACAGCATATGTAAAGGCGATTCGTGCTGCCCAGCATTTTATCTATATTGAAAACCAGTATTTCATTGGGTCTTCATTCAATTGGACTTCTTACAAGAACTTAGGTGCCGACAATATAATTCCAATGGAAATTGCTCTTAAAATTGCCAATAAAATCAGAGCCAATGAGAGATTTGCTGCATATATAGTTGTTCCAATGTGGCCTGAGGGAGTTCCAACAGGTGCCGCTACACAGAGGATTCTGTTTTGGCAGCACAAGACAATGCAAATGATGTACGAAACCATTTACAAGGCTTTAGTAGAGGTTGGACTTGAGGAAGCATTCACTCCACAAGACTATTTGAATTTCTTCTGTCTTGGCAATCGCGAAGCTGTAGATGGGAGTGAAACTCCAGGCACTACGAGTCCTACTGCAGCAAACACTCCTCAAGCACACAGTAGGAAGAACCGTCGATTCATGATCTATGTTCATTCAAAAGGCATGATAGTTGATGATGAGTACGTGATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCATACCAACCTCACTATACCTGGGCACGGAAACTGTCTAATCCACGTGGACAGATCTATGGATACAGGATGTCCCTGTGGGCAGAGCATACCGGAACCATTGAGGACTGCTTCGTGGAACCAGAGAGTCTGGAATGTGTAAAGAGGGTTAGGTCCATGGGTGAGATGAACTGGAAACAATTTGCATCGGACGACATATCAGAAATGAGGGGACACCTCCTGAAGTACCCAGTTGAAGTTGATCGAAAGGGCAAGGTGAAGCCCATTCCCAAATGCGAAACTTTTCCAGATGCAGGAGGAAACATCGTGGGATCATTTCTTGCCATTCAGGAGAATCTTACCATTTGA | 2823 | 44.21 | MYPSVPSPSLPPSSAHHSGPLEYYHPPPPQSAPIPYPYPYPVSPMPLSSPQPSLQQHSSFQYGSSHYHYQQPESYPPSETYSHAPGRANSFSSHSSGSFGMGSSPNHEVVHDSSPLYPPIYPQLDDHLSNLHLSDNHASAPASPSAPSVRDSPPRYPSLSGSNSFSSGWESYSGRQDSSLHSAYYHSSSFNGSQHSQNLQIVPSKGSLKVLLLHGNLDICVNEAKNLPNMDMFHKTLGDITSDPYVSISVSGAVIGRTFVISNSENPIWKQKFYVPVAHHAAEVHFMVKDNYLGVPGTYFPLRRGGTVTLYQDAHVPDGCLPSPMLAQGTPYVHGKCWHDIFDAICQAQRLIYITGWSVWDKVRLVRDASSAAEYTLGELLKSKSQEGVRVLLLLWDDPTSRNILGYKTDGIMQTHDEETRRFFKHSSVQVLLCPRFAGKRHSWIKQREVETIYTHHQKTVILDADAGCNRRKIIAFVGGLDLCDGRYDTPHHPLFRSLEKEHKDDYHNPTFTGNVAGCPREPWHDMHCKIDGPAAYDVLTNFQERWLKAAKPHGIKKLKMSYDDALLKIERIPDILGISDAPCLGENDPEAWHVQVFRSIDSNSVKGFPKDSRDALQKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSFNWTSYKNLGADNIIPMEIALKIANKIRANERFAAYIVVPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEEAFTPQDYLNFFCLGNREAVDGSETPGTTSPTAANTPQAHSRKNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSNPRGQIYGYRMSLWAEHTGTIEDCFVEPESLECVKRVRSMGEMNWKQFASDDISEMRGHLLKYPVEVDRKGKVKPIPKCETFPDAGGNIVGSFLAIQENLTI* | 941 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 15273727 | 15289657 | - | Vvi15g494 | Vvi15g494 | 777186 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g494 | 940 | MobiDBLite | consensus disorder prediction | 49 | 110 | - | - | |
Vvi15g494 | 940 | ProSiteProfiles | C2 domain profile. | 195 | 334 | IPR000008 | - | |
Vvi15g494 | 940 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 452 | 487 | IPR001736 | GO:0003824 | |
Vvi15g494 | 940 | Pfam | Phospholipase D Active site motif | 453 | 487 | IPR001736 | GO:0003824 | |
Vvi15g494 | 940 | Pfam | Phospholipase D Active site motif | 787 | 813 | IPR001736 | GO:0003824 | |
Vvi15g494 | 940 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 786 | 813 | IPR001736 | GO:0003824 | |
Vvi15g494 | 940 | PANTHER | PHOSPHOLIPASE D | 155 | 290 | IPR015679 | - | |
Vvi15g494 | 940 | PANTHER | PHOSPHOLIPASE D | 291 | 940 | IPR015679 | - | |
Vvi15g494 | 940 | Pfam | C2 domain | 215 | 291 | IPR000008 | - | |
Vvi15g494 | 940 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 213 | 293 | IPR035892 | - | |
Vvi15g494 | 940 | SMART | pld_4 | 786 | 813 | IPR001736 | GO:0003824 | |
Vvi15g494 | 940 | SMART | pld_4 | 452 | 487 | IPR001736 | GO:0003824 | |
Vvi15g494 | 940 | Gene3D | Endonuclease Chain A | 601 | 837 | - | - | |
Vvi15g494 | 940 | MobiDBLite | consensus disorder prediction | 22 | 48 | - | - | |
Vvi15g494 | 940 | Gene3D | Endonuclease Chain A | 328 | 567 | - | - | |
Vvi15g494 | 940 | SMART | C2_3c | 216 | 337 | IPR000008 | - | |
Vvi15g494 | 940 | SUPERFAMILY | Phospholipase D/nuclease | 621 | 872 | - | - | |
Vvi15g494 | 940 | Pfam | Phospholipase D C terminal | 860 | 930 | IPR024632 | - | |
Vvi15g494 | 940 | SUPERFAMILY | Phospholipase D/nuclease | 295 | 551 | - | - | |
Vvi15g494 | 940 | Gene3D | C2 domain | 210 | 295 | IPR035892 | - | |
Vvi15g494 | 940 | PANTHER | PHOSPHOLIPASE D ALPHA 1 | 291 | 940 | - | - | |
Vvi15g494 | 940 | PANTHER | PHOSPHOLIPASE D ALPHA 1 | 155 | 290 | - | - | |
Vvi15g494 | 940 | MobiDBLite | consensus disorder prediction | 1 | 167 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g494 | K01115 | - | vvi:100250490 | 1356.66 |