Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g494 ATGTACCCATCAGTTCCAAGTCCTTCGTTACCACCTTCTTCAGCCCACCATTCAGGGCCTTTAGAGTATTATCACCCTCCGCCACCTCAGTCAGCTCCAATTCCCTATCCATACCCTTATCCAGTTTCGCCAATGCCCCTTAGTTCTCCTCAGCCAAGCCTTCAACAGCATAGTAGTTTCCAATATGGGTCATCCCATTACCACTACCAACAACCTGAGTCATACCCACCTAGTGAAACCTATTCTCATGCGCCTGGCCGGGCCAATAGCTTCTCTAGTCATAGTTCGGGGTCTTTTGGAATGGGATCATCACCGAATCATGAAGTTGTTCATGATTCCTCACCTTTATACCCTCCTATTTATCCCCAGTTGGACGATCATTTAAGCAATCTGCATTTGTCTGATAATCATGCATCTGCCCCTGCTTCTCCCTCAGCGCCTTCAGTGCGGGATTCTCCTCCAAGGTATCCGAGTTTGAGTGGAAGTAACTCATTTTCCAGTGGTTGGGAGTCGTACTCAGGTAGGCAGGATTCCTCTCTTCATTCTGCCTATTACCATTCAAGCTCGTTTAATGGCTCGCAGCATAGTCAGAATTTGCAGATTGTGCCCTCTAAAGGGTCCTTGAAGGTTCTGCTTTTACATGGGAATTTAGATATTTGTGTTAATGAAGCAAAAAACCTTCCAAACATGGACATGTTTCATAAAACTTTAGGAGATATCACTAGTGATCCATACGTCTCAATTTCAGTATCAGGTGCTGTAATTGGAAGGACTTTTGTAATTAGTAACAGTGAAAATCCCATCTGGAAGCAAAAATTCTATGTTCCTGTTGCACATCATGCTGCTGAGGTACACTTTATGGTAAAAGATAATTATCTTGGTGTTCCTGGAACATATTTTCCACTGAGAAGAGGTGGAACAGTTACTCTTTACCAAGACGCCCATGTTCCTGATGGGTGCCTTCCAAGCCCAATGCTTGCTCAGGGGACGCCTTACGTACATGGAAAGTGTTGGCATGACATCTTTGATGCAATATGTCAGGCCCAGCGTCTGATTTACATCACAGGTTGGTCTGTGTGGGACAAAGTTAGACTGGTTCGGGATGCTAGTTCTGCAGCAGAGTACACCCTTGGGGAACTTCTGAAATCGAAGTCACAGGAAGGGGTGAGGGTACTGCTTCTTTTATGGGATGATCCTACTTCAAGGAACATTTTGGGTTATAAAACAGATGGAATCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAGCACTCCTCAGTGCAAGTGCTACTTTGTCCCCGCTTTGCTGGAAAACGACATAGTTGGATCAAGCAGAGGGAAGTTGAAACAATCTATACTCACCATCAAAAAACTGTTATCCTGGATGCTGATGCTGGTTGTAATAGAAGGAAAATCATAGCTTTTGTTGGAGGACTTGATCTATGTGATGGGCGATATGATACTCCTCATCATCCTCTATTTAGGTCACTGGAAAAGGAGCATAAAGATGACTATCATAACCCAACTTTCACGGGGAATGTTGCTGGTTGTCCCAGAGAACCATGGCATGACATGCACTGTAAAATAGATGGTCCCGCAGCATATGACGTTCTGACCAACTTTCAGGAGCGCTGGTTAAAAGCTGCTAAACCCCATGGGATAAAAAAATTGAAGATGTCCTATGATGATGCTCTGCTCAAGATAGAAAGAATTCCTGACATCCTTGGGATTTCTGATGCTCCTTGCCTTGGTGAGAATGATCCTGAGGCTTGGCATGTTCAGGTTTTTCGCTCAATTGATTCAAATTCTGTTAAGGGCTTTCCGAAGGACTCAAGGGATGCTTTACAAAAGAACCTGGTATGTGGGAAGAATGTATTGATTGACATGAGCATACATACAGCATATGTAAAGGCGATTCGTGCTGCCCAGCATTTTATCTATATTGAAAACCAGTATTTCATTGGGTCTTCATTCAATTGGACTTCTTACAAGAACTTAGGTGCCGACAATATAATTCCAATGGAAATTGCTCTTAAAATTGCCAATAAAATCAGAGCCAATGAGAGATTTGCTGCATATATAGTTGTTCCAATGTGGCCTGAGGGAGTTCCAACAGGTGCCGCTACACAGAGGATTCTGTTTTGGCAGCACAAGACAATGCAAATGATGTACGAAACCATTTACAAGGCTTTAGTAGAGGTTGGACTTGAGGAAGCATTCACTCCACAAGACTATTTGAATTTCTTCTGTCTTGGCAATCGCGAAGCTGTAGATGGGAGTGAAACTCCAGGCACTACGAGTCCTACTGCAGCAAACACTCCTCAAGCACACAGTAGGAAGAACCGTCGATTCATGATCTATGTTCATTCAAAAGGCATGATAGTTGATGATGAGTACGTGATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCATACCAACCTCACTATACCTGGGCACGGAAACTGTCTAATCCACGTGGACAGATCTATGGATACAGGATGTCCCTGTGGGCAGAGCATACCGGAACCATTGAGGACTGCTTCGTGGAACCAGAGAGTCTGGAATGTGTAAAGAGGGTTAGGTCCATGGGTGAGATGAACTGGAAACAATTTGCATCGGACGACATATCAGAAATGAGGGGACACCTCCTGAAGTACCCAGTTGAAGTTGATCGAAAGGGCAAGGTGAAGCCCATTCCCAAATGCGAAACTTTTCCAGATGCAGGAGGAAACATCGTGGGATCATTTCTTGCCATTCAGGAGAATCTTACCATTTGA 2823 44.21 MYPSVPSPSLPPSSAHHSGPLEYYHPPPPQSAPIPYPYPYPVSPMPLSSPQPSLQQHSSFQYGSSHYHYQQPESYPPSETYSHAPGRANSFSSHSSGSFGMGSSPNHEVVHDSSPLYPPIYPQLDDHLSNLHLSDNHASAPASPSAPSVRDSPPRYPSLSGSNSFSSGWESYSGRQDSSLHSAYYHSSSFNGSQHSQNLQIVPSKGSLKVLLLHGNLDICVNEAKNLPNMDMFHKTLGDITSDPYVSISVSGAVIGRTFVISNSENPIWKQKFYVPVAHHAAEVHFMVKDNYLGVPGTYFPLRRGGTVTLYQDAHVPDGCLPSPMLAQGTPYVHGKCWHDIFDAICQAQRLIYITGWSVWDKVRLVRDASSAAEYTLGELLKSKSQEGVRVLLLLWDDPTSRNILGYKTDGIMQTHDEETRRFFKHSSVQVLLCPRFAGKRHSWIKQREVETIYTHHQKTVILDADAGCNRRKIIAFVGGLDLCDGRYDTPHHPLFRSLEKEHKDDYHNPTFTGNVAGCPREPWHDMHCKIDGPAAYDVLTNFQERWLKAAKPHGIKKLKMSYDDALLKIERIPDILGISDAPCLGENDPEAWHVQVFRSIDSNSVKGFPKDSRDALQKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSFNWTSYKNLGADNIIPMEIALKIANKIRANERFAAYIVVPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEEAFTPQDYLNFFCLGNREAVDGSETPGTTSPTAANTPQAHSRKNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSNPRGQIYGYRMSLWAEHTGTIEDCFVEPESLECVKRVRSMGEMNWKQFASDDISEMRGHLLKYPVEVDRKGKVKPIPKCETFPDAGGNIVGSFLAIQENLTI* 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15273727 15289657 - Vvi15g494 Vvi15g494 777186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g494 940 MobiDBLite consensus disorder prediction 49 110 - -
Vvi15g494 940 ProSiteProfiles C2 domain profile. 195 334 IPR000008 -
Vvi15g494 940 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 452 487 IPR001736 GO:0003824
Vvi15g494 940 Pfam Phospholipase D Active site motif 453 487 IPR001736 GO:0003824
Vvi15g494 940 Pfam Phospholipase D Active site motif 787 813 IPR001736 GO:0003824
Vvi15g494 940 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 786 813 IPR001736 GO:0003824
Vvi15g494 940 PANTHER PHOSPHOLIPASE D 155 290 IPR015679 -
Vvi15g494 940 PANTHER PHOSPHOLIPASE D 291 940 IPR015679 -
Vvi15g494 940 Pfam C2 domain 215 291 IPR000008 -
Vvi15g494 940 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 213 293 IPR035892 -
Vvi15g494 940 SMART pld_4 786 813 IPR001736 GO:0003824
Vvi15g494 940 SMART pld_4 452 487 IPR001736 GO:0003824
Vvi15g494 940 Gene3D Endonuclease Chain A 601 837 - -
Vvi15g494 940 MobiDBLite consensus disorder prediction 22 48 - -
Vvi15g494 940 Gene3D Endonuclease Chain A 328 567 - -
Vvi15g494 940 SMART C2_3c 216 337 IPR000008 -
Vvi15g494 940 SUPERFAMILY Phospholipase D/nuclease 621 872 - -
Vvi15g494 940 Pfam Phospholipase D C terminal 860 930 IPR024632 -
Vvi15g494 940 SUPERFAMILY Phospholipase D/nuclease 295 551 - -
Vvi15g494 940 Gene3D C2 domain 210 295 IPR035892 -
Vvi15g494 940 PANTHER PHOSPHOLIPASE D ALPHA 1 291 940 - -
Vvi15g494 940 PANTHER PHOSPHOLIPASE D ALPHA 1 155 290 - -
Vvi15g494 940 MobiDBLite consensus disorder prediction 1 167 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g419 Vvi15g494 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g494 K01115 - vvi:100250490 1356.66