Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g498 ATGTCAAGGTCATCTCCATGTATGCATTCCAACCTTCTTCTTCTTCTGATCGTCTTTGCAGGTCTTACCCTCATTAACGCCGAGAAGAAGTTTTACATCGTATACTTTGGAGATAGACCTGAAAGCATAGAAGCCACAGTTCAAACACATCAGGACATCCTCTCACAATGTGGTGTTGATACTGAGGAATCCATAGTCTACAGCTACACCAAGAGCTTCAATGCATTGGCTGCGAAGCTGTCTGAGGATGAAGCCCAAAAGCTATCAGAAATGGAAGGGGTTGTTTCTGTTTTTCCAAATCGGTACCACAAGCTTCACACAACAAAATCATGGGATTTCATTGGACTACCTCAAACAGCAAGAAGGCAATTGAAACAGGAGAGCAACATTATTGTGGGGCTACTGGATACAGGGATCACGCCGCAGTCAGAGAGCTTTGCGGATAATGGCCTGGGTCCGCCGCCGGCCAAATGGAAGGGGACTTGTCTCCGCTTTGCTAATTTCTCAGGGTGTAACCACAAGCTCATAGGAGCCAAATACTTCAAGCTGGATGGCAACTCCGACCCTGATGACATCTTATCTCCGGTGGACGTTGAGGGTCATGGCACCCACACAGCTTCCACCTCAGCAGGAAACATCGTCCAGAACGCAAACCTTTTTGGCCTGGCTAAGGGGACTGCACGTGGGGCTGTGCCTTCAGCTAGGGTTGCCATGTACAAGGTATGTTGGGTCCGCTCAGGCTGCTCGGACATGGACATTCTTGCTGCATTTGAGGCTGCCATTGCCGATGGCGTCGACATTATCTCCATCTCGATTGGTGGGGTTTCCCCCAATTATGCAGAGGACTCCATAGCTATTGGGGCTTTTCATGCCATGAAGAAAGGGATCCTCACTGTAGCTTCTGCCGGAAATGATGGACCCAGTCAGAGTAGTATTGTAAATCATGCACCGTGGATTTTCACGGTGGGGGCTAGCAGCATTGATCGAGGGTTTAGGAGCAAAGTTGTGCTGGGCAATGGACAAACCTTCTCGGGTATTGGAGTGAGTACATTCGATCCGAAGCAGCAGAACCCTCTGGTAAGTGGTGCAGATGTAGCCAAGACTGCTGCGGACAAAGAGAACTCAAGGTTCTGCATTGAAAACTCATTGGATCCTACTAAGGTGAATGGCAAGCTGGTCTACTGCAAGCTACAAATGTGGGGATCCGACTCTGTGGTTAAAGGACTTGGAGGGATTGGAACTATTGTTGAAAGCATGGAGTTTCTTGATGCTGCCCAGATCTTCATGGCACCAGGAACTATGGTTAATGACACCGTTGGATATGCCATTAATCGTTATATACATTCCACAAAAACACCATCAGCAGTGATACAAAGGTCCGAGGAAGTAAAAGTCCCGGCTCCCTTTGTGGCTTCATTCTCATCGAGAGGTCCAAACCCTATGACCCAACACATACTCAAGCCTGATATTGTAGCACCTGGGATTGACATATTGGCGTCCTACACCCCTTTGAGGTCGCTAACCGGGCTGAAGGGCGACACCCAGTTCTCCAAATTTACGCTCTTGTCTGGCACTTCCATGGCGTGTCCACACGTTTCTGGAGTAGCAGCCTATGTAAAGTCTTTCCACCCGAAGTGGTCTCCTGCTGCCATCAGATCCGCCATCATGACCACTGCAAAACCGATGAGCAGGAAGGTGAACAATGATGCTGAATTCGCCTATGGTACTGGCCAAGTAAACCCTCATAGAGCTCTGAGCCCCGGCCTCATCTATGACACGGATGAGATGTCTTACATCCAGTTCCTATGCCATGAGGGCTATAGCGGCAAAGCTATCGCCACCATTGTTGGTTCAAAATCCATAAACTGTTCCTCACTGCTCCCCGGACAAGGCAGTGATGCTCTCAACTATCCCACCATGCAGCTAAGCTTGAAAGACACTAATGAACCCACAGTAGGCGTCTTCCGGAGGAGAGTGACCAATGTGGGTCCTGCTCAATCTGTCTATAATGCCACCATTAAAGCTCCCCAAGGAGTGGAAATAACTGTGACACCTACCAGGCTTGTCTTCTCCCGGGCCCTGCAAGCACGAAGTTTCAAGGTTGTGGTGAAGGCAAAATCGACTGCTTTTAAGGAAATGGTATCGGGTTCGCTCACATGGAGAAGCCCTAGACACATTGTGAGGAGCCCTATTGTGATTTATAAACCATGA 2211 48.94 MSRSSPCMHSNLLLLLIVFAGLTLINAEKKFYIVYFGDRPESIEATVQTHQDILSQCGVDTEESIVYSYTKSFNALAAKLSEDEAQKLSEMEGVVSVFPNRYHKLHTTKSWDFIGLPQTARRQLKQESNIIVGLLDTGITPQSESFADNGLGPPPAKWKGTCLRFANFSGCNHKLIGAKYFKLDGNSDPDDILSPVDVEGHGTHTASTSAGNIVQNANLFGLAKGTARGAVPSARVAMYKVCWVRSGCSDMDILAAFEAAIADGVDIISISIGGVSPNYAEDSIAIGAFHAMKKGILTVASAGNDGPSQSSIVNHAPWIFTVGASSIDRGFRSKVVLGNGQTFSGIGVSTFDPKQQNPLVSGADVAKTAADKENSRFCIENSLDPTKVNGKLVYCKLQMWGSDSVVKGLGGIGTIVESMEFLDAAQIFMAPGTMVNDTVGYAINRYIHSTKTPSAVIQRSEEVKVPAPFVASFSSRGPNPMTQHILKPDIVAPGIDILASYTPLRSLTGLKGDTQFSKFTLLSGTSMACPHVSGVAAYVKSFHPKWSPAAIRSAIMTTAKPMSRKVNNDAEFAYGTGQVNPHRALSPGLIYDTDEMSYIQFLCHEGYSGKAIATIVGSKSINCSSLLPGQGSDALNYPTMQLSLKDTNEPTVGVFRRRVTNVGPAQSVYNATIKAPQGVEITVTPTRLVFSRALQARSFKVVVKAKSTAFKEMVSGSLTWRSPRHIVRSPIVIYKP* 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15340665 15344250 - Vvi15g498 Vvi15g498 777190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g498 736 SUPERFAMILY Subtilisin-like 105 589 IPR036852 GO:0004252|GO:0006508
Vvi15g498 736 Pfam Subtilase family 128 577 IPR000209 GO:0006508|GO:0008236
Vvi15g498 736 CDD PA_subtilisin_like 335 457 - -
Vvi15g498 736 CDD Peptidases_S8_3 103 559 IPR034197 -
Vvi15g498 736 Gene3D Peptidase S8/S53 domain 129 598 IPR036852 GO:0004252|GO:0006508
Vvi15g498 736 Gene3D - 328 463 - -
Vvi15g498 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Vvi15g498 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 734 IPR045051 -
Vvi15g498 736 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 31 734 - -
Vvi15g498 736 Pfam Fibronectin type-III domain 635 733 IPR041469 -
Vvi15g498 736 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Vvi15g498 736 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Vvi15g498 736 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Vvi15g498 736 ProSiteProfiles Serine proteases, subtilase domain profile. 110 585 - -
Vvi15g498 736 Gene3D - 602 735 - -
Vvi15g498 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 106 IPR037045 -
Vvi15g498 736 Pfam Peptidase inhibitor I9 32 106 IPR010259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g435 Vvi15g498 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g498 - - vvi:100259224 1449.11