Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g50 ATGTTGGTCCGCAGGTGGGATTTCTGGCTATATTACATAGCATACCTCTGTGGGGGAACGATTGGGCTAGCTTACAGTAATAACCTAGGGCAGATTTCAGAATCACTAGGATACAGTTCAGAGACTAATATGATTGTCACACTCTACTCAGCATGCTCATTCTTTGGACGTTTGCTTTCAGCTGCACCAGACTTTCTGAAAAACAAGGTGTACTTTGCGAGGACAGGGTGGCTTGCGGTAGCCCTTGTGCCGACACCTCTTGCCTTCTTTTGGCTTGCTCTGTCTGGCAGCAAGATAGCATTGCATGCAGGCACGGGCTTGATTGGGCTTAGCTCTGGGTTCGTATTTGCAGCAGCTGTGTCTATCACATCAGAACTATTTGGGCCTAACAGTACCGGGGTCAACCACAACATCCTCATCACAAACATCCCACTTGGCTCGCTCCTTTATGGCCTGCTGGCAGCTCTAGTGTATGATTCTAATATAGAAAGTTCAAAACAAAAGAGGGAATCAGAATTCTTTTAG 525 46.67 MLVRRWDFWLYYIAYLCGGTIGLAYSNNLGQISESLGYSSETNMIVTLYSACSFFGRLLSAAPDFLKNKVYFARTGWLAVALVPTPLAFFWLALSGSKIALHAGTGLIGLSSGFVFAAAVSITSELFGPNSTGVNHNILITNIPLGSLLYGLLAALVYDSNIESSKQKRESEFF* 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1788806 1789799 + Vvi15g50 Vvi15g50 776742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g50 174 Gene3D MFS general substrate transporter like domains 1 165 IPR036259 -
Vvi15g50 174 PANTHER NODULIN-LIKE/MFS TRANSPORTER 1 169 - -
Vvi15g50 174 SUPERFAMILY MFS general substrate transporter 2 160 IPR036259 -
Vvi15g50 174 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g50 - - vvi:100262611 328.561