Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g522 ATGTTTGGACGTTGTCTTTCACTACATTTCATGTGCGTTGAACGAGAGGTGTCCTTCCGTACTGCAGGCGGCTTTGGAATGGTAAGACTAATGATGACAAGGGTGACTAGATCACTCTTTCCATCGTACAGATGGCTGCTTGTGGTATGGAGTCCTTACATCTTCCCATCTTTTACTTTAATTATTTTTGCTCTTGGCTCCAGCAAGCGGAAATTCGGCATGGCCAGGCTTCAGCCAGGCCCCCTGCTAAACAAAAATGACCAAGCCTTCTCCAGCAGGGCTGTCCTCAATGCCGTCCAAGCCGTGAACCATCACAAATTTTCAGTGGTCTTTCTACCGGCATCCGCTCATTGGCGCAACCTCAGGAAGATTTGCAGCACGCAGATGCTTTCCTTGCCTCGTATTGACGCCTGCAGAGCCCTGCGCCGAAGAATTGTGCAACAACTCCTAGATCATGCTCATGAAAGTTGCACCAGCAGCCGGGCAGTCGACATTGGCAGAGCGGCCTCAACAACCGCCCTCAATTTGTTATCAAACACCATTTTCTCTGTTGATTTGGCTCACTATGATTCCAATTTTTCACAAGAGTTCAAGGATCTAGTGTGGAGTATAATGGAAGAAGCTGGAAAGCCTAATCTTGCAGACTTTTTTCCAGGGCTTAGTTTCATTGATCCACAAGGAATACAGAAAAAGATGACAGCCAATTTTTATAAACTAGTCAAGGTTTTTGATGGCATCATCGATCAACGGTTGCAATTAAAGGCTTCTTCGGCAAACAATGATGTACTGGATTCCCTCCTCAATCTCAACAAACAACATGACCATGAGTTGAGTAGCAACGATATCAAACATCTGCTTGTGGACCTATTTTCTGCGGGAACTGACACCACTTCGAGCACGGTAGAGTGGGCAATGGCGGAATTATTGAACAACCCAAAAGCAATGGCAAAAGCTCGAAGTGAGCTGGATGAAGTGCTAGGCAAAGGCATGATAGTTGAAGAATCGGACATTTCAAAGCTTCCTTATTTACAAGCAGTAGTAAAAGAAACCTTCAGATTGCACCCACCAGTCCCATTTCTGGTTCCTAGAAAGACCGAAATGGAGTCAGAAATATTAGGCTATGCAGTGCCAAAAAATGCTCAAGTTCTTGTCAATGTATGGGCTATTGGCCGAGATCCCATGTTGTGGACCAACCCTAATTCATTTGTGCCTGAAAGGTTTTTGGAGTGCGAGATCGATGTCAAGGGTCGAGATTTCCAGCTCATTCCATTTGGTGCTGGAAGAAGAATCTGTCCTGGATTGCTATTAGGCCATAGGATGGTCCACTTGATGTTGGCTTCTCTCCTTCACTCCTTTGACTGGAAGCTTGAAGATGGTATGAAACCAGAAGACATGGACATGACTGAGAAGTTCGGATTTACATTGAGGAAGGCCCAACCTCTCCAGGCCTCATTAATAAAGAAATATAATATTTGCTTCACTGTCAAGCTACCATGCTGCTATAATTTTGAGTAA 1515 44.88 MFGRCLSLHFMCVEREVSFRTAGGFGMVRLMMTRVTRSLFPSYRWLLVVWSPYIFPSFTLIIFALGSSKRKFGMARLQPGPLLNKNDQAFSSRAVLNAVQAVNHHKFSVVFLPASAHWRNLRKICSTQMLSLPRIDACRALRRRIVQQLLDHAHESCTSSRAVDIGRAASTTALNLLSNTIFSVDLAHYDSNFSQEFKDLVWSIMEEAGKPNLADFFPGLSFIDPQGIQKKMTANFYKLVKVFDGIIDQRLQLKASSANNDVLDSLLNLNKQHDHELSSNDIKHLLVDLFSAGTDTTSSTVEWAMAELLNNPKAMAKARSELDEVLGKGMIVEESDISKLPYLQAVVKETFRLHPPVPFLVPRKTEMESEILGYAVPKNAQVLVNVWAIGRDPMLWTNPNSFVPERFLECEIDVKGRDFQLIPFGAGRRICPGLLLGHRMVHLMLASLLHSFDWKLEDGMKPEDMDMTEKFGFTLRKAQPLQASLIKKYNICFTVKLPCCYNFE* 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15654855 15688221 - Vvi15g522 Vvi15g522 777214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g522 504 Pfam Cytochrome P450 82 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 Gene3D Cytochrome P450 76 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Vvi15g522 504 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 SUPERFAMILY Cytochrome P450 82 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g522 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 82 484 - -
Vvi15g522 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 82 484 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g442 Vvi15g522 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g522 - K26037 vvi:100252376 682.559