Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g532 ATGGTGTCCATGGACTTTTTCTGCAACCCCATGTACCTGGTTGTCGCAATTTCTGCTCTAACCCTTGTTTTTCTCATGAAAATCTTAGTGGGAAAATCAACAGAAAAGAAGAGGAGGTATCACCCTATTGGCGGTACAATCTTCAACCACCTCTTCAACTTCAACAGGTTGCACCACTACATGACTGATGTTGCTGGGAAGCACAGGACTTACAGGCTACTCAGCCCCTTTAGGAATGAGATTTTCACTGCTGACCCAGCTAATGTCGAGTATATACTCAAGACAAACTTCGAGAATTATGGCAAGGGCTCCTATAACTATAACATTCTGAGGGATCTACTTGGTGATGGAATTTTCACAGTTGACGATGAGAAATGGCGGCAACAGAGAAAGGTATCGAGCTATGAATTCTCTACAAAGGTATTGAGGGACTTCAGCAGTGTAGTTTTCCGAAAAAATGGGGCAAAACTTGCTATAGTAGTGTCTGAAGCTGCAAGCTTCAACCAGACAATGGATATTCAAGATCTTTTTATGAAAGCAACCTTAGATTCGATATTCAAATTTGCATTTGGGGTAGAGCTAGACAGCATGTGTGGATCAAATGAAGAAGGCACCAAGTTTGGCAGCGCATTTGATGATGCGAGTGCCATGACCCTTTATCGGTATGTTGATATCTTCTGGACAATCAAGAAAAGTCTGAATATCGGTTCAGAAGCCACGTTAAAGAGGAGTATCAAAGTGGTTGATGACTTTGTGTACAAGCTAATCCACAGCAAGACTGAACTAATGAAGAATTCACAAAATGATTCTTCAATGAAGAAAGACGATATTTTATCAAGGTTTCTGCAGTTGAAGGACATAGAGATTGATCCAAAATACTTACGGGATATAATCCTCAATTTTATAACTGCTGGAAAAGACACGACAGCAACTACTCTTTCCTGGTTCATTTACATGCTTTGCAAGCATCCCACCATTCAGGAAAAGGTGGCACAAGAAGTGAGGGAAGCGATCAACCTGAAAGAGGCCACAAACTATGCCGAGTTTGCAGCCAGTGTTACTGAAGAAGCTCTGGAGAAGATGCAGTATCTCCATGCTGCTATAACTGAGACTCTACGACTCTATCCTGCAGTTCCTGTGGATGCAAAGATTTGCTTTTCAGATGACACGCTGCCAGATGGGTTCAGTGTGAGGAAAGGAGATATGGTGTCTTACCAACCATATGCAATGGGCAGGATGAGATTTGTATGGGGCGATGATGCAGAGGAATTCCGACCAGAGAGATGGCTTAATGAGAAGGGCCTTTTTTGCCCAGAAAGCCCTTTCAAATTCACTGCATTTCAGGCAGGCCCGAGAATTTGTTTGGGAAAGGAGTTTGCTTATAGGCAGATGAAGATCCTCTCAGCCATTCTGTCCGGTTGTTTTGTTTTTAAGATGAGCGACGATAAGAAAGCTGTGACTTACAGGACAATGATCACCCTTCTTATTGATGGAGGCCTCCATGTTCGTGCTTTCCACAGGCCAGACACAAAGATTCTGGAGGCTTGA 1548 42.96 MVSMDFFCNPMYLVVAISALTLVFLMKILVGKSTEKKRRYHPIGGTIFNHLFNFNRLHHYMTDVAGKHRTYRLLSPFRNEIFTADPANVEYILKTNFENYGKGSYNYNILRDLLGDGIFTVDDEKWRQQRKVSSYEFSTKVLRDFSSVVFRKNGAKLAIVVSEAASFNQTMDIQDLFMKATLDSIFKFAFGVELDSMCGSNEEGTKFGSAFDDASAMTLYRYVDIFWTIKKSLNIGSEATLKRSIKVVDDFVYKLIHSKTELMKNSQNDSSMKKDDILSRFLQLKDIEIDPKYLRDIILNFITAGKDTTATTLSWFIYMLCKHPTIQEKVAQEVREAINLKEATNYAEFAASVTEEALEKMQYLHAAITETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMRFVWGDDAEEFRPERWLNEKGLFCPESPFKFTAFQAGPRICLGKEFAYRQMKILSAILSGCFVFKMSDDKKAVTYRTMITLLIDGGLHVRAFHRPDTKILEA* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15891922 15894930 - Vvi15g532 Vvi15g532 777224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g532 515 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PANTHER CYTOCHROME P450 13 509 - -
Vvi15g532 515 Pfam Cytochrome P450 46 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 PANTHER CYTOCHROME P450-RELATED 13 509 - -
Vvi15g532 515 Gene3D Cytochrome P450 38 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g532 515 SUPERFAMILY Cytochrome P450 40 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g532 - - vvi:100245370 1034.63