Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g533 ATGGATCTTTTCGGCGAAGGAATATTCGCTGTGGACGGCGGTGCGTGGCGGCACCAGAGGAAGCTTGCGAGCTTTGAGTTCTCCACCAGGGTTCTCAGGGACTTCAGCTGCGCCGTCTTTAGAACCAACGCCGCCAAACTTGCCGGGAAAGTCAAGGAGTTTTCGGATGCGGGTCGGGTTTTTGATGTACAGGATATACTAATGAAATGCGGATTGGATTCCATATTCAAAGTTGGGTTCGGAGTGGAATTGAATTGCTTGGAGGGCTCAAACCAAGAAGGAAATGCATTCATCAAAGCCTTCGATGATTCCAATGCTTTGGTCTACTGGCGCTACGTCGATCCTCTCTGGACTCTCAAAAGATTTCTCAACATCGGCTCCGAAGCCTCCCTCAAGAAAAGCATCAAGGTCATGGACGATTTCGTATACAACCTCATACGGACCAAAAGAAAACAGCTCTCCATCCAACAATACACTAATGACAAGGAAGACATTCTTTCTAGATTTCTGCTGGAGAGCCAGAAGGATCCGGAGCAGATGAATGATCGGTATCTTAGGGATATTATTCTGAATTTCACTATCGCTGGTAAAGATTCGACTGCAAATACTCTTTCATGGTTTTTCTATGTGCTTACCAAGCACCCTCTGGTGCAAGAAAAAGTTGTGCAAGAGATAAGAGAAGTGATGGACTGTGGAGATGATGATAAAGCTCATGGGTATGAAGATTTTGTGGCAAAAATCACTGATGGTGTGTTGGAGAAAATGCAGTATCTTCATGCAGCATTGACAGAGACATTGAGGCTATACCCTGCTGTCCCTATAGATGGGAGATGTGCAGATGCAGATGACATTCTTCCTGATGGCCATAAACTAAAACAAGGAGATGGGGTATACTACATGTCCTATGCCATGGGCAGGATGTCTTACATTTGGGGAGAAGATGCCAAGGAATTTCGCCCCGAAAGATGGCTCAACAATGGAGTTTTCCAACCCGAATCCCCATTCAAATTCGTAGCATTCCATGCTGGTCCTCGAATTTGTTTGGGCAAGGACTTCGCTTACAGGCAAATGAAGATATCAGCAATGACACTTCTTCACTTTTTCCGCTTTAAATTAGAGGATGCTACAAGAAATGTTACGTACAAGACCATGTTCACACTCCACATCAATGGAGGCCTCCATCTGCAGGCAATTCCAAGGAGAAACTTCTTATCTTCCAAGTAG 1224 45.1 MDLFGEGIFAVDGGAWRHQRKLASFEFSTRVLRDFSCAVFRTNAAKLAGKVKEFSDAGRVFDVQDILMKCGLDSIFKVGFGVELNCLEGSNQEGNAFIKAFDDSNALVYWRYVDPLWTLKRFLNIGSEASLKKSIKVMDDFVYNLIRTKRKQLSIQQYTNDKEDILSRFLLESQKDPEQMNDRYLRDIILNFTIAGKDSTANTLSWFFYVLTKHPLVQEKVVQEIREVMDCGDDDKAHGYEDFVAKITDGVLEKMQYLHAALTETLRLYPAVPIDGRCADADDILPDGHKLKQGDGVYYMSYAMGRMSYIWGEDAKEFRPERWLNNGVFQPESPFKFVAFHAGPRICLGKDFAYRQMKISAMTLLHFFRFKLEDATRNVTYKTMFTLHINGGLHLQAIPRRNFLSSK* 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15906645 15909432 - Vvi15g533 Vvi15g533 777225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g533 407 Gene3D Cytochrome P450 1 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS P450 superfamily signature 195 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS P450 superfamily signature 260 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS P450 superfamily signature 338 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 SUPERFAMILY Cytochrome P450 2 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS E-class P450 group I signature 184 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS E-class P450 group I signature 204 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS E-class P450 group I signature 259 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g533 407 PANTHER CYTOCHROME P450 2 402 - -
Vvi15g533 407 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
Vvi15g533 407 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 2 402 - -
Vvi15g533 407 Pfam Cytochrome P450 5 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g533 - - vvi:100259039 831.247