Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g558 ATGTCACATACAAATTACTATATAATCAAAATCTATGTAAAAACTATTCTAATAGCTAGACACTATGTAAAAACTATTCTTATAGTCATAAAATATTTGCAAATTACAACTAAAAGATACACAATTCCAAAAGGATGGATTGTAGTGGTTTGTCCATCAGTGCCTCATTTGGATCCTACCAAGTACAAGGATCCATTTGCTTTCAATCCATGGCGATGGGAGGGGCAAGAATTGCATGCTGGGTCCAAAAATTTCATGGCATTTGGTGGAGGTGTGAGACTGTGTGCGGGGGCTCATTTTGCCAAGCTTCAAATGGCTATTTTTCTCCATTATTTGGTCACGAAATACAGGTACTTAATTTCTTTTTTCTTATTTTAA 378 35.19 MSHTNYYIIKIYVKTILIARHYVKTILIVIKYLQITTKRYTIPKGWIVVVCPSVPHLDPTKYKDPFAFNPWRWEGQELHAGSKNFMAFGGGVRLCAGAHFAKLQMAIFLHYLVTKYRYLISFFLF* 126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16088930 16091721 + Vvi15g558 Vvi15g558 777250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g558 125 Pfam Cytochrome P450 38 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 Gene3D Cytochrome P450 15 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 88 97 IPR017972 GO:0005506|GO:0016705
Vvi15g558 125 PRINTS E-class P450 group IV signature 40 54 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 PRINTS E-class P450 group IV signature 56 74 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 PRINTS E-class P450 group IV signature 79 95 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 PRINTS E-class P450 group IV signature 95 113 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 SUPERFAMILY Cytochrome P450 38 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g558 125 PANTHER CYTOCHROME P450 26 34 119 - -
Vvi15g558 125 PANTHER P450, PUTATIVE-RELATED 34 119 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g558 Vvi16g611 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g558 - - rcu:8258282 148.673