Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g579 ATGGCTTGTAGCACAGCAGTTAATCATTCTGTGTTAGGGCTTCAACGCCAAATTGTTGGGAAGAGGCTATCCCTCCTTTCATTGCCTGCAATTACAAACCTTGGTGGCATTCCCAGAAGGAGAAGAAGCTGTCATGTCTATGCCCATCTTCAACCTTCCGTTGTTTCCGATGACCCCAAGTATGGCAACAAACAGGTCATCACAATTACTCCACGCCTTTACGACTATATATTGACAAACGTTCGGGAGCCTGAGATTCTAAGGCAACTTCGGGAGGAGACTGCTAATATGCGGGGTTCTCAAATGCAGGTATCTCCGGAGCAGGCACAACTACTTGCCATGCTCGTCCAGATTCTCGGGGCGGAACGATGTATTGAAGTTGGTGTTTACACTGGATACTCATCGTTGGCTATTGCTTTAGTCCTACCAGAATCAGGTTATTTAGTTGCTTGTGAAAGAGATTCCAAATCTCTTGAGGTTGCAAAAAGGTACTACAAGCAGGCTGGTGTGTCACACAAGGTGGACGTGAAACACGGACTAGCATCAGATGCTCTAAAATCTTTGATTTTAAATGGAGAATCTGGCAGCTATGATTTTGCATTTGTTGATGCTGAGAAGAGAATGAATCAAGAATACTTTGAATTGCTACTGCAACTGGTGAGGACCAGGGGTGTCATTGTGATTGATAATGTTCTCTGGCATGGAAAAGTTGCTGATCCTCTGGTAAATGATGCTAGGACTGTCAGCATAAGAAATTTTAATAAAAATATCATGGAGGACAAGCGTGTAAGCATCAGTATGGTACCTATTGGAGACGGCATAACAATCTGCAGAAAAAGATGA 843 43.53 MACSTAVNHSVLGLQRQIVGKRLSLLSLPAITNLGGIPRRRRSCHVYAHLQPSVVSDDPKYGNKQVITITPRLYDYILTNVREPEILRQLREETANMRGSQMQVSPEQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGYLVACERDSKSLEVAKRYYKQAGVSHKVDVKHGLASDALKSLILNGESGSYDFAFVDAEKRMNQEYFELLLQLVRTRGVIVIDNVLWHGKVADPLVNDARTVSIRNFNKNIMEDKRVSISMVPIGDGITICRKR* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16407195 16411129 + Vvi15g579 Vvi15g579 777271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g579 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 280 IPR029063 -
Vvi15g579 280 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 52 280 - -
Vvi15g579 280 Pfam O-methyltransferase 81 279 IPR002935 GO:0008171
Vvi15g579 280 CDD AdoMet_MTases 123 228 - -
Vvi15g579 280 PANTHER O-METHYLTRANSFERASE-RELATED 52 280 - -
Vvi15g579 280 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 63 280 IPR002935 GO:0008171
Vvi15g579 280 Gene3D Vaccinia Virus protein VP39 56 280 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g579 - - vvi:100259246 540.806