Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g603 ATGTTACACAACATGCCCCACCCTACCTTGCAAGAAGAAATGCAGACTCATAATGGCAGTGATGGGAAGCAAGAGGCGGCAGAGCACTACTCCAGAGCTATGCAGATGGCGACCTCGTCTGTGGTATGTATGGCTATGCATGTGGCCAACGAGCTTGGCCTTTTTGACATCATTGCCAAAGTGGGTCAGGCTTCTGCCTCACAGATAGCATCCCACTTAGCCACAAACAACCCGAACGCACCCACAATGCTGGATCGCATTCTCTACGTTCTCACCGCTCACTCTCTCCTCACTTGCTCTGTCGATGACACTGATGATGGGCACTCCAAGAGGGTATACGGGCTCACCCCCGTCTCCAAATTATTCGCCCGTAACGAAGATGGGGTTTCGTTTGCTCCATTAATGGCGTTGAACCAGGACAAAATCTTCATTGGTAGCTGGTTCGAAATGACAAACGCGATTCTTGAAGGAGGGATACCATTTGACAGGGCCCATGGATCAAACGCATTTGAGTACCCTAGAAAGGACCTCAGGTTCAACAAGGTTTTTAACGCAGCAATGCACAACTACACAACCCTATTTATTAACGAGACCCTCGAGTCCTACAAGGGTTTTGAGCACCTCAAAGAGGTGGTGGACGTGGGTGGAGGTCTTGGGGTCACCCTCGGTGCCATCACATCCAAGTACCCCAGCATTAAGGGCATTAACTTCGACTTGCCTCATGTTATAGAACATGCCCCACACTATCCAGGCGTAGAACATGTCGGAGGAGATATGTTTGAGAGCGTTCCCAAAGGAGAAGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCTTGAAGTTGTTAAAGAACTGCTACAATGCTCTACCGGAGCATGGGAAGGTGATAGAGCGGACTCGAGAGGAGTTCCTGGACCTGGCAACTGGAGCTGGGTTTGCTGGAATCAGATTTGAATGCTTTGTCCTTACTTATTGGGTCATGGAATTCTTTAAGTAA 1011 48.66 MLHNMPHPTLQEEMQTHNGSDGKQEAAEHYSRAMQMATSSVVCMAMHVANELGLFDIIAKVGQASASQIASHLATNNPNAPTMLDRILYVLTAHSLLTCSVDDTDDGHSKRVYGLTPVSKLFARNEDGVSFAPLMALNQDKIFIGSWFEMTNAILEGGIPFDRAHGSNAFEYPRKDLRFNKVFNAAMHNYTTLFINETLESYKGFEHLKEVVDVGGGLGVTLGAITSKYPSIKGINFDLPHVIEHAPHYPGVEHVGGDMFESVPKGEAIFMKWILHDWSDEHCLKLLKNCYNALPEHGKVIERTREEFLDLATGAGFAGIRFECFVLTYWVMEFFK* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16627957 16638187 + Vvi15g603 Vvi15g603 777295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g603 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 334 IPR029063 -
Vvi15g603 336 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 24 301 - -
Vvi15g603 336 SUPERFAMILY Winged helix DNA-binding domain 25 125 IPR036390 -
Vvi15g603 336 Gene3D Vaccinia Virus protein VP39 123 336 IPR029063 -
Vvi15g603 336 PIRSF O-mtase 302 336 IPR016461 GO:0008168
Vvi15g603 336 PIRSF O-mtase 10 301 IPR016461 GO:0008168
Vvi15g603 336 Gene3D - 10 121 IPR036388 -
Vvi15g603 336 Pfam Dimerisation domain 44 92 IPR012967 GO:0046983
Vvi15g603 336 PANTHER O-METHYLTRANSFERASE 24 301 IPR016461 GO:0008168
Vvi15g603 336 MobiDBLite consensus disorder prediction 1 27 - -
Vvi15g603 336 Pfam O-methyltransferase domain 147 301 IPR001077 GO:0008171
Vvi15g603 336 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 336 IPR016461 GO:0008168
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g270 Vvi15g603 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g603 K13066 - vvi:100255690 640.188