Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g604 ATGCTCAACCACACAATTATGATTACTAATAAAATCGTTGAATCCTACAAGGGTTTTGGGAATCTTAAGCAGGTGGTGGATGTTGGTGGCGGTCTGGGAACCACACTTGGTATAATCACATCAAAATACCCCAGCATCAAGGCAATTAATTTTGACTTGCCTCACGTTATACAGCATGCTTTGCCTTATCCTGGGGTGGAACACCTTGGAGGAGATATGTTTGAAAGTGTTCCCAATGGAGAAGCCATGTTTCTGAAGTGGATACTTCATGACTGGAGTGATGAACACTGCTTGAAGTTGTTGAAGAACTGCTACAAAGCTCTGCCAGAGCATGGCAAGGCAATTGTGGTGGAGGGGTTTCTCCCAGAAATACCGGAGGGGAGTGCTTCTGTGCAAGCTCTCTGTGAAGGAGATTTGATTATGATGACTCAAAACCCTGGAGGAAGGGAGCGGACAAAGCAGGAGTTCCTGGACCTGGCAATGGCAGCTGGATTTGCTGGCATCAGATTTGAGTGCCTTGTGTATAATTACTGGATCATGGAATTCTTCAAGTAA 555 45.23 MLNHTIMITNKIVESYKGFGNLKQVVDVGGGLGTTLGIITSKYPSIKAINFDLPHVIQHALPYPGVEHLGGDMFESVPNGEAMFLKWILHDWSDEHCLKLLKNCYKALPEHGKAIVVEGFLPEIPEGSASVQALCEGDLIMMTQNPGGRERTKQEFLDLAMAAGFAGIRFECLVYNYWIMEFFK* 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16645032 16646455 + Vvi15g604 Vvi15g604 777296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g604 184 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 184 IPR016461 GO:0008168
Vvi15g604 184 PANTHER O-METHYLTRANSFERASE 1 184 IPR016461 GO:0008168
Vvi15g604 184 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 182 IPR029063 -
Vvi15g604 184 Pfam O-methyltransferase domain 2 166 IPR001077 GO:0008171
Vvi15g604 184 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 184 - -
Vvi15g604 184 Gene3D Vaccinia Virus protein VP39 1 184 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g604 K13066 - vvi:100260763 368.237