Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g606 ATGCTCTACCTTCTTACCACTCACTCTGTTCTCAGTTGCTCTGCCATTGATGGTGATGAGAGGGTGTACGCACTCACACCTGTCTCCAAATACTTTGCCAGTAATCAAGGAGTTTCCTTCGGCCCACTACTGGCTTTGATCCAGGACAAGGTCTTCATGGATAGCTGGTCCCAACTGAAAAATGCGATTATTGAAGGAGGAATACCATTTAACAGGGTCCATGGATCTCATGCATTTGAGTACCCTGGCAAGGACCCCAGATTCAATCAGGTTTTCAACACAGCAATGTTCAACCACACAACGGTAATTGTTAATAAGATCCTTGAGTCCTACAAGGGTTTTGAGCACCTTACGCGGGTGGTCGATGTTGGTGGCGGTCTGGGAACCACCCTTAGCATAATCACATCCAAATACCCCCATATTGAGGCTATTAATTTTGACTTGCCTCATGTTATAGAACATGCTGTGGCGTATCCTGGTGTGAAACACATTGGAGGGGATATGTTTGTAAGTGTTCCCAAAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGATCACTGCTTAAAGTTGTTGAAGAACTGCTACAAAGCTCTACCAGAGCATGGGAAGGTGATTGAAAGGAGAGGACAAGGAAGGAGTTCCTGGACTTGA 666 45.05 MLYLLTTHSVLSCSAIDGDERVYALTPVSKYFASNQGVSFGPLLALIQDKVFMDSWSQLKNAIIEGGIPFNRVHGSHAFEYPGKDPRFNQVFNTAMFNHTTVIVNKILESYKGFEHLTRVVDVGGGLGTTLSIITSKYPHIEAINFDLPHVIEHAVAYPGVKHIGGDMFVSVPKGDAIFMKWILHDWSDDHCLKLLKNCYKALPEHGKVIERRGQGRSSWT* 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16662902 16665185 + Vvi15g606 Vvi15g606 777298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g606 221 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 221 IPR016461 GO:0008168
Vvi15g606 221 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 210 IPR029063 -
Vvi15g606 221 CDD AdoMet_MTases 119 210 - -
Vvi15g606 221 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 2 210 - -
Vvi15g606 221 Gene3D - 1 32 IPR036388 -
Vvi15g606 221 Pfam O-methyltransferase domain 56 210 IPR001077 GO:0008171
Vvi15g606 221 Gene3D Vaccinia Virus protein VP39 33 212 IPR029063 -
Vvi15g606 221 PANTHER O-METHYLTRANSFERASE 2 210 IPR016461 GO:0008168
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g270 Vvi15g606 ECH
Vvi15g606 Vvi16g956 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g606 K13066 - vvi:100265990 428.328