Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g642 ATGGGAACACATGTTGAAAGCTTTTGGATCTTCGCTTTGGTTTCCAAATGCGAAGCTCTTTCTCTGGCCAGCATTGCATGGGTCGTTTTCTTTGCTTGGTTTCTGCTGAGCATGATTTTTTGGGCTTACCCTGGTGGCCCCGCTTGGGGGAAGTACAGGTGGAGGAAAGCTTCTCCGTCGGCTTCCATGGGTAAGCCGATACCGGGTCCGAGAGGTTTTCCGGTGGTTGGGAGTATGAAGCTTATGGCCAGCCTTGCCCACCACCGGATTGCTGCGGCGGCGGAGGCCTGTGGAGCCAAGCGGCTTATGGCTTTCAGCCTGGGCGAGACTCGGGTTATCGTTACCTGCAATCCTGATGTTGCGAAAGACATTCTGAACAGCTCCGTGTTTGCTGATCGTCCGGTGAAGGAGTCGGCTTACAGTCTGATGTTCAACAGAGCAATTGGGTTCGCTGCCTACGGAGTTTACTGGCGAACCCTCCGGAGGATCGCTGCCACGCATCTCTTCTGCCCGAAACAGATCAAAGCCTCGGAGGCTCAGCGAGCGGAGATCGCCGCTGAAATGGCGGCAATGTTTGGAGAAAACACAGAGCCTTTCCGCGTCCGAGACGTCCTGAAACGGGCTTCACTCAGCAGCATGATGTGCTCTGTTTTTGGACGAAAATACCAGCTCGATTCCTCCAACAACGAAGCTCACGAACTCAGGACTCTTGTCGAAGAAGGCTACGACCTCTTGGGCACTCTCAACTGGTCCGACCACCTTCCCTTTCTCGGAGACTTTGACCCACAAAAGATCCGCATGAGATGCTCCAACCTTGTCCCCAAAGTCAACCGCTTCGTTACCAGAATCATCGCTGAACACCGTGCCCGAACCACTGAAAAAATCCGAGATTTCGTCGATGTTTTGCTCTCCCTTCAAGGGCCTGATAAATTATCCGACTCCGATATGATCGCCGTCCTTTGGGAAATGATATTTAGGGGGACTGATACAGTGGCGGTTTTGATCGAGTGGATACTCGCGAGGTTGGTGCTCCACCCCGACGTCCAATCACGAGTCCACGACGAGCTCGACAGGGTCGTCGGAGAGTCACGCGCTGTCGCCGAGTCTGATATCACGGCCATGGAGTACCTCCCCGCGGTGGTGAAAGAGGTTATCAGGCTGCACCCTCCTGGTCCACTCCTCTCGTGGGCTCGATTGGCTACAACTGATACAACCGTTGATGGGCATCACGTGCCAGCTGGGACTACAGCCATGGTCAATATGTGGGCCATCACCCGGGACCCGAACGTGTGGTCAGACCCACTCGAATTTAAGCCCGATAGGTTCTCTGGAATGGGAGCTGACACCGATATATCTGTATTCGGTTCTGATCTTCGACTCGCCCCGTTTGGGTCGGGCCGCAGGGTCTGCCCTGGAAAGACTCTTGGGTTGACCACGGTTACCTTTTGGGTAGCCTCGCTTTTGCACGAGTTTGAATGGAAGCCGTTGGATGGGAATAATAACGTTGACCTGTCGGAAGTTCTGAAGCTGTCGTGTGAGATGGAGAAGCCCCTCACCGTCAAAGTGCACCGTAGGCGTAGTACTAGTACCTCATCCCCATAA 1602 54.18 MGTHVESFWIFALVSKCEALSLASIAWVVFFAWFLLSMIFWAYPGGPAWGKYRWRKASPSASMGKPIPGPRGFPVVGSMKLMASLAHHRIAAAAEACGAKRLMAFSLGETRVIVTCNPDVAKDILNSSVFADRPVKESAYSLMFNRAIGFAAYGVYWRTLRRIAATHLFCPKQIKASEAQRAEIAAEMAAMFGENTEPFRVRDVLKRASLSSMMCSVFGRKYQLDSSNNEAHELRTLVEEGYDLLGTLNWSDHLPFLGDFDPQKIRMRCSNLVPKVNRFVTRIIAEHRARTTEKIRDFVDVLLSLQGPDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARLVLHPDVQSRVHDELDRVVGESRAVAESDITAMEYLPAVVKEVIRLHPPGPLLSWARLATTDTTVDGHHVPAGTTAMVNMWAITRDPNVWSDPLEFKPDRFSGMGADTDISVFGSDLRLAPFGSGRRVCPGKTLGLTTVTFWVASLLHEFEWKPLDGNNNVDLSEVLKLSCEMEKPLTVKVHRRRSTSTSSP* 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17005384 17007393 + Vvi15g642 Vvi15g642 777334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g642 533 PANTHER CYTOCHROME P450 78A7-RELATED 1 528 - -
Vvi15g642 533 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 Gene3D Cytochrome P450 59 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vvi15g642 533 PANTHER CYTOCHROME P450 78A6 1 528 - -
Vvi15g642 533 Pfam Cytochrome P450 68 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 SUPERFAMILY Cytochrome P450 65 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g642 533 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g238 Vvi15g642 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g642 K20619 - vvi:104881848 1041.18