Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g651 ATGGAAGAAAATCCGTTTCCTGCATGGTCTTGGTCTGTGGAGCAGTGTCTGAAAGAATACAATGTGAGAATAGATAAGGGCCTGAGCAGCTATGAGGTTGAGAAACGGCGTGAGAGGTACGGTTGGAACGAACTCACCAAAGAAAAAGGGAAGCCGCTATGGCGTCTTGTATTGGAACAGTTTGATGATATGCTTTTGCGTGTTGAAAATATGGTTTTTGCAGGGACAACAGTTGTTAATGGAAGCTGCATTTGTATTGTTGTGAACACTGGGATGAACACTGAGATTGGGAAAATACAGACACAAATACATGAGGCCTCTTTGGAAGAGAGCAACACTCCTTTGAAGAAGAAACTGGATGAATTTGGAAATAGGCTTACGACTGTAATTGGGCTTGTTTGCCTCATTGTTTGGGTGATCAATTACAAATATTTTCTCACATGGGATCTTATTGCTGTTGCTCTTGCAGTAGCTGCAATCCCAGAGGGCCTTCCTGCAGTAATCACAACTTGTTTAGCTCTCGGTACAAGAAAAATGGCACAAAAGAATGCAATTGTACGGAAGCTTCCAAGTGTGGAGACCTTGGGATGTACAACTGTGATTTGTTCGGATAAAACTGGGACCTTGACAACAAACCAGATGTCGGCGACAGAATTTTTCACATTAGGGGGGAAAATCACATCTTCTCGAATTTTTCATGTGGAAGGCTCAACTTATGATCCAAAGGATGCAACAGGTTTGCCCACTGAGGCAGCTCTCAAGGTTTTGCTTGCTGCAAGCTATTTGATTGATCGCAGTACGGTGAAGTTAGGATGTTGTGAATGGTGGACAAAAAGATCAAAAAGAGTTGCTACACTAGAGTTTGACCGCATTCGCAAATCAATGAGTGTTCTCGTCCGTGAGCCCACTGGGCGCAATCGACTTCTTGTCAAGGGTGCTGTTGAGAGTCTATTGGAGCGCAGTTCACATGTGCAGCTTGCTGATGGATCACTTGTTCCCTTAGATGAACCTTATAGGCAACTGTTGTTGTTGAGAAACTTGGAAATGAGTTCAAAGGGTCTGCGGTGCTTGGGTCTGGCATATAAAGATGACTTGGGAGAGTTCTCAGACTACTATACTGAGACTCATCCTGCCCACAAGAAGTTGCTTGATCCAGCTTGCTACTCCTCCATTGAGAGTGAACTGGTTTTCGTGGGGGTCGTAGGTCTAAGGGACCCACCTCGTGATGAAGTTCACAAGGCAATTGATGATTGTAGAGAAGCTGGGATCAAGGTTATGGTCATAACTGGAGATAATAAGTCCACTGCTGAGGCCATCTGTCAGGAAATTCGATTGTTTTCCGAAGGTGAGCAACTTAAAGGGGCAAGTTTCACAGGTAAAGAGTTCATGGCTCTTTCCCCATCAGAACAAATTGAAATTCTGTCAAAACCTGGAGGGAAGGTTTTCTCACGCGCTGAGCCTAGGCACAAGCAAGAAATTGTTAGGATGCTGAAAGAGATGGGGGAAATTGTTGCAATGACTGGAGATGGTGTCAATGATGCCCCTGCATTGAAACTTGCTGACATTGGAATCGCCATGGGCATCACCGGGACTGAGGTTGCAAAAGAAGCTTCAGATATGGTTCTGGCAGATGACAATTTCAGTACCATAGTTTCAGCCGTTGCAGAGGGTCGCTCAATTTATAACAACATGAAGGCTTTTATTAGGTATATGATATCTTCCAATGTTGGGGAGGTTATATCCATTTTCTTAACTGCTGCACTGAGCATACCAGAATGTATGATACCTGTGCAGCTTCTGTGGGTCAATTTGGTCACCGATGGTCCACCTGCAACAGCTCTTGGATTTAACCCTGCTGATGTTGATATAATGCGGAAACCACCTCGTAAAAGTGATGATGCTCTGATAAACTCTTGGGTTCTCTTCCGTTACTTGGTAATTGGTTCATATGTGGGCATTGCAACTGTAGGAATCTTCATTTTGTGGTACACCCAGGCTTCATTTCTTGAGTGCTCCTCATGGTCCAATTTCACTGTCACTCCATTCACAGTTGGTGATGGGCGGGTGATCACATTTTCAAATCCTTACAACAGCTTAGTCACAATGCCACCCTGGAGGAATCCTTGGCTTCTTGTTGCTATGTCATTCTCATTTGGGATGCATTGCCTCATACTCTATGTTCCCTTCCTGGCAGATGTTTTTGGTATCGTCCCTCTGAGTCTGAATGAATGGTTTCTTGTTATCCTGGTTTCTGCACCTGTGATTCTTATCGATGAGGTTCTTAAATTAGTGGGAAGGAGACGAAGATGGAAAAGAAAGAAGAAGAAGACAGCATAA 2337 44.07 MEENPFPAWSWSVEQCLKEYNVRIDKGLSSYEVEKRRERYGWNELTKEKGKPLWRLVLEQFDDMLLRVENMVFAGTTVVNGSCICIVVNTGMNTEIGKIQTQIHEASLEESNTPLKKKLDEFGNRLTTVIGLVCLIVWVINYKYFLTWDLIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDATGLPTEAALKVLLAASYLIDRSTVKLGCCEWWTKRSKRVATLEFDRIRKSMSVLVREPTGRNRLLVKGAVESLLERSSHVQLADGSLVPLDEPYRQLLLLRNLEMSSKGLRCLGLAYKDDLGEFSDYYTETHPAHKKLLDPACYSSIESELVFVGVVGLRDPPRDEVHKAIDDCREAGIKVMVITGDNKSTAEAICQEIRLFSEGEQLKGASFTGKEFMALSPSEQIEILSKPGGKVFSRAEPRHKQEIVRMLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALSIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRKSDDALINSWVLFRYLVIGSYVGIATVGIFILWYTQASFLECSSWSNFTVTPFTVGDGRVITFSNPYNSLVTMPPWRNPWLLVAMSFSFGMHCLILYVPFLADVFGIVPLSLNEWFLVILVSAPVILIDEVLKLVGRRRRWKRKKKKTA* 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17129506 17134086 - Vvi15g651 Vvi15g651 777343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g651 778 PANTHER CALCIUM-TRANSPORTING ATPASE 244 669 - -
Vvi15g651 778 PANTHER CALCIUM-TRANSPORTING ATPASE 696 770 - -
Vvi15g651 778 PANTHER CALCIUM-TRANSPORTING ATPASE 67 243 - -
Vvi15g651 778 ProSitePatterns E1-E2 ATPases phosphorylation site. 204 210 IPR018303 -
Vvi15g651 778 SMART Cation_ATPase_N_a_2 7 82 IPR004014 -
Vvi15g651 778 Pfam E1-E2 ATPase 68 182 - -
Vvi15g651 778 Gene3D - 56 231 - -
Vvi15g651 778 SFLD Haloacid Dehalogenase 183 559 - -
Vvi15g651 778 Pfam haloacid dehalogenase-like hydrolase 199 521 - -
Vvi15g651 778 Pfam Cation transporting ATPase, C-terminus 592 764 IPR006068 -
Vvi15g651 778 Pfam Cation transporter/ATPase, N-terminus 9 66 IPR004014 -
Vvi15g651 778 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 209 403 IPR023299 GO:0000166
Vvi15g651 778 PRINTS P-type cation-transporting ATPase superfamily signature 202 216 - -
Vvi15g651 778 PRINTS P-type cation-transporting ATPase superfamily signature 399 410 - -
Vvi15g651 778 PRINTS P-type cation-transporting ATPase superfamily signature 421 431 - -
Vvi15g651 778 PRINTS P-type cation-transporting ATPase superfamily signature 507 526 - -
Vvi15g651 778 PRINTS P-type cation-transporting ATPase superfamily signature 531 543 - -
Vvi15g651 778 Gene3D - 232 410 IPR023299 GO:0000166
Vvi15g651 778 PANTHER CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE 244 669 - -
Vvi15g651 778 PANTHER CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE 67 243 - -
Vvi15g651 778 PANTHER CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE 696 770 - -
Vvi15g651 778 SUPERFAMILY HAD-like 200 611 IPR036412 -
Vvi15g651 778 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 769 IPR023298 -
Vvi15g651 778 Gene3D - 492 692 - -
Vvi15g651 778 Gene3D - 693 777 - -
Vvi15g651 778 SFLD p-type atpase 183 559 IPR044492 -
Vvi15g651 778 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 94 228 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi15g651 778 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 480 596 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g651 K01537 - vvi:100253574 1292.72