Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g655 ATGAATTTTAGGCATGGTTTGGTAATGCAAGGGGCTGAGGACGAGGACGAGGCCGCCTATGTCGAGAAAGATCCCACTGGTCGATATGTTCGGTTCAAAGAAATATTGGGCAAGGGCGCATTCAAGACTGTCTATAAGGCATTTGACGAAGTTGATGGAATAGAAATCGCTTGGAACCAAGTGAAGATTGACGATGTCTTGCGGTCACCAGAAGATTTGGAAAAACTATATTCTGAAGTTCATCTCCTGAAATCATTAAAACATGAAAATATTATCAAATTCTATAATTCCTGGGTGGATGATAAGAAGAAGACTGTTAACATGATTACTGAGCTCTTCACGTCTGGGAGTCTAAGGCAATATCGAAAGAAGCACAAAAATGTTGATATGAAGGCTATAAAGAATTGGGCAAGGCAGGTTCTTCGAGGTTTGGTGTATCTTCACAGTCACAACCCACCAATTATTCATAGAGACTTAAAATGTGACAATATATTTGTCAATGGAAATCATGGGGAAGTTAAAATTGGAGACCTCGGACTGGCAATTGTTATGCAGCAGCCTACTGCTCGAAGTGTTATTGGGACTCCCGAGTTCATGGCTCCAGAGCTTTATGAAGAAGAATATAACGAACTTGTCGACATATATTCTTTTGGGATGTGCATGTTGGAGATGGTTACTTTTGAGTATCCATATAATGAATGCAAAAATCCGGCTCAAATCTATAAGAAGGTTACCTCTGGCATCAAACCTGCTTCTCTTTGTAAGGTGACGGATCTCCAAATTAAGGAGTTCATTGTGAAATGTCTGGCTCCAGCATCTGAAAGATTACCTGCAAAGGAGCTTCTCAAAGATCCATTCTTTCAATCTGAGAATCCAAAGGAGCCGATCCGTGTCCCTTTGCATCCAGATTTTCCAGTCTTGGAATTTCAGAGGATGTACAAAAGCAGTGAATTTAGATTGAGGGCAAAGAAAATTAATGATAACTCAATATCATTAACTTTGCGTACTGTTGACTCGTATGGTCCAGTGAAGAATATTCATTTTCCCTTTTCACTTGATACTGACACTGTACACTCTGTAGTGGGTGAGATGGTTGAACAACTGGAGTTAGCAGAACATGAGGTGGCCTTCATAGCTGATTTTATTGATTACGTGATAATGAGACTTCTGCCCGGTTGGAAGCCTCCACGTGATGATCCCTTAGGTGGAGCAAGGAGTCCAAATGCAGAGCCTCCAGTACTTGGAAATGGTAACAACCATGATTGTACTATTTCCCATGGTGATGGTAATTCTTCTCCAAATTTGGCTAATGCAGAAGATCAGGATTCATTGGCATCTGCTGGTTTGGTGACCCTGACTGTAGATGCTTCCAAAAAAAATGATAAAACGGTGGGATTTGGAGATTACAATATTGGTGGCAACTATAAAGGTTCAAATGGTGGGCATGCCTCTGAACAGGAGTCTAGGGATCCATACCATGAAGACTACAAATTGCAAAGAAATAATAGCAACATAGATCAGGATCCTGGGCTAAAGCAGGAGCTTGATGCTATTGACTTACAGTATCAGCATTGGTTTCAAGAGCTTTCTAGGATGAGAGTAGAGGCATTAGAGGCCACTAAGAAGAGATGGATGACAAAGAAGAAGCTGGCTTCTCGCTTGAGTGTATATATGATTTCCGGGATTCAACTAAATCTATTGGATGACTATCTATGTTTGTACTCTTGTCTCATTCTTTATTCAATTGCTTTGCATTTCATGCTTACTGCATTCTAG 1776 40.6 MNFRHGLVMQGAEDEDEAAYVEKDPTGRYVRFKEILGKGAFKTVYKAFDEVDGIEIAWNQVKIDDVLRSPEDLEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQVLRGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFEYPYNECKNPAQIYKKVTSGIKPASLCKVTDLQIKEFIVKCLAPASERLPAKELLKDPFFQSENPKEPIRVPLHPDFPVLEFQRMYKSSEFRLRAKKINDNSISLTLRTVDSYGPVKNIHFPFSLDTDTVHSVVGEMVEQLELAEHEVAFIADFIDYVIMRLLPGWKPPRDDPLGGARSPNAEPPVLGNGNNHDCTISHGDGNSSPNLANAEDQDSLASAGLVTLTVDASKKNDKTVGFGDYNIGGNYKGSNGGHASEQESRDPYHEDYKLQRNNSNIDQDPGLKQELDAIDLQYQHWFQELSRMRVEALEATKKRWMTKKKLASRLSVYMISGIQLNLLDDYLCLYSCLILYSIALHFMLTAF* 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17151470 17154829 - Vvi15g655 Vvi15g655 777347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g655 591 CDD STKc_WNK 28 287 - -
Vvi15g655 591 Gene3D Phosphorylase Kinase; domain 1 13 111 - -
Vvi15g655 591 Gene3D Transferase(Phosphotransferase) domain 1 113 293 - -
Vvi15g655 591 ProSiteProfiles Protein kinase domain profile. 30 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g655 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Vvi15g655 591 MobiDBLite consensus disorder prediction 418 438 - -
Vvi15g655 591 Gene3D - 328 390 - -
Vvi15g655 591 PANTHER KINASE DOMAIN PROTEIN 418 505 - -
Vvi15g655 591 PANTHER KINASE DOMAIN PROTEIN 12 299 - -
Vvi15g655 591 PANTHER KINASE DOMAIN PROTEIN 308 419 - -
Vvi15g655 591 PANTHER KINASE DOMAIN PROTEIN 504 550 - -
Vvi15g655 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 504 550 - -
Vvi15g655 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 308 419 - -
Vvi15g655 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 418 505 - -
Vvi15g655 591 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 299 - -
Vvi15g655 591 SMART serkin_6 30 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g655 591 SUPERFAMILY Protein kinase-like (PK-like) 31 329 IPR011009 -
Vvi15g655 591 Pfam Protein kinase domain 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g655 591 MobiDBLite consensus disorder prediction 398 438 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g219 Vvi15g655 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76247 PF00069 Pkinase 6.80E-53 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g655 K08867 - vvi:100248376 1083.17