Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g677 ATGAAAACTGAAATGGGTATGGGAGGAGGGGCTTGGACGGAGGAGGATAAAGCGATGGTGGCGGCTGTTTTGGGCACTCGAGCATTTGATTACTTGATGACCAGCTCCGTTGTGAGTGAGAATCTGTTAATGGCAGTGGGGAGTGATGAAAATTTGCAGACAAAGCTTTCGGATCTCGTAGACCGACCAAATGCATCCAATTTCAGTTGGAATTATGCAATTTTCTGGCAAATTTCACAGTCCAAGTCTGGGGATTGGGTGCTTGGATGGGGAGATGGGTCTTGTAGGGAGCCCAGGGAAGGGGAGGAATCCGAAGTGACCCGAATTTTAAATATTCGGCTCGAGGATGAAACCCAGCAGAGGATGAGGAAAAGGGTGCTTCAGAAGCTGCATACATTGTTTGGAGGCTCGGATGAGGACAGTTATGCTTTTGGATTGGACCGAGTCACTGATACTGAAATGTTTTTTCTCGCTTCCATGTACTTCTCATTTACCAGAGGAGAAGGTGGCCCAGGGAAATCTTTTGGATCTGGGAAGCATTTGTGGCTGTCTGATGCATTGAAATCTCCATCAGATTATTGTGTTCGATCATTCCTTGCCAAATCTGCTGGAATTCAGACCATTGTGTTAATCCCAACTGATGTTGGGGTTGTAGAGCTGGGTTCTGTGAGGTCATTACCTGAAAGCTTAGAGATTCATCCAAACATTCAAGGAGGCACAGATCACAGTGATCGAGTCGAAACTTGCTGCAGCCAATGA 759 46.51 MKTEMGMGGGAWTEEDKAMVAAVLGTRAFDYLMTSSVVSENLLMAVGSDENLQTKLSDLVDRPNASNFSWNYAIFWQISQSKSGDWVLGWGDGSCREPREGEESEVTRILNIRLEDETQQRMRKRVLQKLHTLFGGSDEDSYAFGLDRVTDTEMFFLASMYFSFTRGEGGPGKSFGSGKHLWLSDALKSPSDYCVRSFLAKSAGIQTIVLIPTDVGVVELGSVRSLPESLEIHPNIQGGTDHSDRVETCCSQ* 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17338365 17341476 + Vvi15g677 Vvi15g677 777369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g677 252 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 235 IPR025610 -
Vvi15g677 252 PANTHER MYC 5 237 IPR045084 GO:0003700|GO:0006355
Vvi15g677 252 PANTHER TRANSCRIPTION FACTOR MTB1 5 237 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g677 - - vvi:100233036 456.447