Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi15g732 | ATGAATTTCAAGCAGAAATTTGTAAGGTTTCAGGAATGGAGTCCAGCAAGATCCGTGAGTTCTGAGGGGCAATTCCCCCCATACCGGAGAGGAACTAGAGCAACTATAAGTGGAATTCTTGAGAGGATTCAGGAAGGATTTGCAACAGTTTCGGAAAGGATTCAGAGCTGGAGAAAATCACTAAGCCTCCCTTCAAGAACCAGAAAGCCATCAAAAGAATTGAAGAGTCCCAGGAAGAAAATTCTTGACCCCCAGGGTTCGTTTCTTCAGGAGTGGAATAAAGTATTCCTCATCTCTACTGTACTTGCAGTTGCCTTGGATCCATTTTTCTTTTACATCCCAATTCTTCATCGCGAGGAGACCTGCCTTGATTTGGACACGAAACTGGGGGTCATTGCTTGTGTTCTTCGTTCAATTGTGGACATCTTTTACATTCTTCATATTATCTTTCAGTTCCATACTGGGTTTATCGCCCCTTCTTCTAGAGTGTTTGGGAGGGGTGAATTAGTTGAAGCCCCTTCAGCTATAGCGAAAAGATACTTGTCCACCTACTTCATTATCGATATTCTCTCAATCCTTCCCCTCCCACAGTTGGTTATTCTGATCGTCAAAGCTGAAGTGAAAGGACCGGTTTCATTGAATACAAAGGACTTGTTGAAGTCTGTCATTTTCTCCCAGTATGTGCCGAGACTACTCCGGATTTATCCACTATATAAAGAAGTGACGACAACTTCTGGCATTATTACTCAAACCGCATGGGCTGGGGCTGTTTTCAATCTCTGCCTCTATATGCTGGCCAGTCATGTAGTTGGAGCTTTTTGGTACTTGTTTGCAATAGAACGACAAAATACCTGCTGGGTAAAGGGAAGTCGGTCATGTGGTTTCAATCCTGTAGGTTTGTACTGTGGAGCAGAAAGTAGACGAAATAATATTACTCCACAGGTTCATGATTGTCTAAATGCAGCTTGTCCTCTTATCGACCCTGATGATATTGTGAATACAACAACGTTTAACTTTGGAATATTCTTTGATGCTCTTCAATCTCATGTGGTGGAAAGAAAAGATTTCCAAAATAAATTCTTTTACTGCTTTTGGTGGGGTCTGAGAAATCTTAGTTCTCTGGGACAGAACCTCAAAACAAGCACTTTCATCGAGGAGATCTTCTTTGCTGTGTTTATCTCCATCTTTGGATTGGTTTTATTTTCACTACTCATTGGAAATATGCAGAAATATCTGCAATCCACAACTGTTAGAATCGAAGAGATGAGAGTAAAAAGGCAGGATGCAGAGCAGTGGATGGCTCATCGATTGCTCCCTGACCCCCTGAGGGTGCGGATTAGGCGGTATGAACAATACAAATGGCAAGAAACCAGAGGTGTCCAGGAGCATAAACTTATTTCAGATCTTCCCAAGGACCTCAGGAGAGACGTAAGGCGCCATCTCTGCTGGAATCTGCTAATGAGAGTGCCAATGTTCGAAAAAATGGACAGCCAACTGTTGGATGCACTGTGTGATCACCTAAAGCCAGTTCTTTATACAGAAAACAGCACCATTCTCCGTGAGGGGGATCCTGTTGATGAGATCTTCTTCATCATGCGAGGCAAGCTGTCGACTATAACCACCAATGGTGGAAGAACTGGCTTCTTCAATGAAACTTATCTCAAGGCTGGTGACTTCTGTGGAGATGAGCTTCTCACATGGGCCTTGGAGTCCAAATCCTCTTCCAATCTCCCCATCTCAACCAGAACTGTAAAGGCCATAACTGAGGTTGAAGCCTTTGGTCTAATGTCCAATGACCTGATAACCGTTGCCTCCCAGTTCTTCTACCGTCTCCACAGCAAGCAGCTCCAGTATACTTTCAGGTTCTACTCCCAGCAGTGGAGGACATGGGGAGCCTGCTTTATACAAGCTGCTTGGCAGCGTTACAGGAGGAGGAAGCAGGACAAGGCTTTACAGGAGGCGGAAGAGAGGCTGCAAGATGCTTTATCAAGAGAGGTAGGTGCCTCTCCAAGCCTCGGTGCCACTGTCTTTGCATCAAGGTTTGCTGCCAAACTTCTACGAGCCCTGCGGCGTAACGGTGGACGCAGAACCCGATTGCCACAGAGACTACCACCTTTGATGCCTCAGAAGCCCACTGATCCTGATTTTACTTCGGCAGAGATGAATTTCAAGCTGGTTAATCCATGGTCCAGGAAGACAATTCTTGATCCAGAGGGATCATTTCTTCAGACATGGAATAAAATATTTCTAGTCTCTTGTGTGCTTGCAATTTCCCTCGATGCATTTTTCTTTTATGCCCCTGTTATTAATCGTCATAGTACATGCCTAGATTTGGATGACCGATTGCAGATTGTTGCTTGTGTTCTTCGTACACTCATCGATGTCTTCTACATCCTTCATATTATCTTTCAGTTCCGCACTGGTTTTGTTGCCCCTTCTTCTCGAGTATTTGGAGATGGTGTATTAATTGATGATTCTTCAGTTATAGCGAAAAGATACTTGCCCTACTTCGTCATCGACATTCTATCAATTTTACCCCTCCCACAGGTAGCAGTTTTTATTGTCAACCCACAATTGAAAAGTCCAGTTTCATTCATTAGGAAGGACTTCTTGAAGTTTGTTATTCTCTCCCAATTAGTGCCAAGACTTGTGCGGATCTACCCACTATATAAAGAAGTAACTACAACTTCTGGCATACTTATTGAAACGGCATGGGCTGGTGCTGCTATCAATCTCTTCTTCTATATGCTAGCCAGTCATGTGGTTGGAGCCTTTTGGTACTTGCTGTCTATAGAGAGGCAAGATCAGTGTTGGCGTAATTGGTGTGGGGCACATAATGTGAGTTGTTCATATTTATATTGTGGAGGAGACCGAATACACAATGACCTTGCTGAGCGATATGCATTACTAAATGCTTCTTGCCCTCTTAGTGAACCAGATGGAATTGAAAATTCCACAGTTTTTAACTTTGGAATATTCATTAAGGCTCTTCAGTCTCGGGTTGTGGAAACAAGAGATTTTCCATATAAGTTTTCTTATTGCTTTTGGTGGGGTCTGCGAAATATTAGTTCTCTGGGTTCAAACCTTGATACAAGCCCTTTCATTGGAGAGGTTCTGTTTGCTGTCTTTATTTCCATATTTGGATTGATATTATTTTCATTACTTGTTGGCAATATGCAGAAATATCTGCAAAATCTGCAATCCATAGCTGCTAGAATTGAAGAGGAAAGAGAGAAAAGGAAAAACACTGAGCTGTGGATGTCCCACCGCATCCTTCCTGAGCACCTGAGGATTCGGATTAGGCAGTATAGACAGTACAAATGGAAAAAAACCAAGGGTGTTGACGAAAATGGGCTTATCAATGACCTTCCGAAGGACCTCCGAAGAGACATAAAGCGGCATCTCCGTTTGGCTCTACTTATGAGAATGCCAGTGTTTGAAAGATTTGATGAGCTACTGTTGGATGCAATTTGTGATCGCCTCAAGCCAGTTCTTTATACAGAAGGTAGCTACATTGTCCGTGAGGGGGATCCAATTGATGAAATGCTCTTTATCGTGCGAGGCAAACTAAGAAGCATAAGCACAGATGGTGGAAGAACTGGCTTCCTCAACTTAATTTATCTTGAGGCTGGTGATTTCTATGGAGAAGAGCTTCTTCCATGGGCCTTGGAGTCCCAGTCCTCTCCATTTCACCCCATCTCAACCAGAACCATAAGTGCCGTAACAGAGGTTGAAGCCTCTGCTCTAACGGCTCATGACTTGAAGTCTCTGATCTCCTATCACTTCTCGCATCCTCTTCCCAGAAAGCAGCTTGTGCAGAGTCTCAGGTTGTGGTCACAGAAGTGGAGGACATGGGCTGCCTGTTTTATACAAGTAGCTTGGTGGCGTTACCAGAAGAGGAAGCAAAATAAGGCCTTACAGGAGGCAGAAGACAGGTTGCGAGATGCTTTGTCGAAAGCAGTAGGCACCTCTACAACCTTGGGCGCCACTAATTATGCATCGAGGTTTGCTGCCAATATGTTACGAATCTTGAGGCGCAATGGTGGTAGCAGAGCCAGATTGCCACAAAGATCATGGTTCGCGCTGCCTCCTAAGCCACGTGATCCCCAGCTTACCATCTGA | 4122 | 44.03 | MNFKQKFVRFQEWSPARSVSSEGQFPPYRRGTRATISGILERIQEGFATVSERIQSWRKSLSLPSRTRKPSKELKSPRKKILDPQGSFLQEWNKVFLISTVLAVALDPFFFYIPILHREETCLDLDTKLGVIACVLRSIVDIFYILHIIFQFHTGFIAPSSRVFGRGELVEAPSAIAKRYLSTYFIIDILSILPLPQLVILIVKAEVKGPVSLNTKDLLKSVIFSQYVPRLLRIYPLYKEVTTTSGIITQTAWAGAVFNLCLYMLASHVVGAFWYLFAIERQNTCWVKGSRSCGFNPVGLYCGAESRRNNITPQVHDCLNAACPLIDPDDIVNTTTFNFGIFFDALQSHVVERKDFQNKFFYCFWWGLRNLSSLGQNLKTSTFIEEIFFAVFISIFGLVLFSLLIGNMQKYLQSTTVRIEEMRVKRQDAEQWMAHRLLPDPLRVRIRRYEQYKWQETRGVQEHKLISDLPKDLRRDVRRHLCWNLLMRVPMFEKMDSQLLDALCDHLKPVLYTENSTILREGDPVDEIFFIMRGKLSTITTNGGRTGFFNETYLKAGDFCGDELLTWALESKSSSNLPISTRTVKAITEVEAFGLMSNDLITVASQFFYRLHSKQLQYTFRFYSQQWRTWGACFIQAAWQRYRRRKQDKALQEAEERLQDALSREVGASPSLGATVFASRFAAKLLRALRRNGGRRTRLPQRLPPLMPQKPTDPDFTSAEMNFKLVNPWSRKTILDPEGSFLQTWNKIFLVSCVLAISLDAFFFYAPVINRHSTCLDLDDRLQIVACVLRTLIDVFYILHIIFQFRTGFVAPSSRVFGDGVLIDDSSVIAKRYLPYFVIDILSILPLPQVAVFIVNPQLKSPVSFIRKDFLKFVILSQLVPRLVRIYPLYKEVTTTSGILIETAWAGAAINLFFYMLASHVVGAFWYLLSIERQDQCWRNWCGAHNVSCSYLYCGGDRIHNDLAERYALLNASCPLSEPDGIENSTVFNFGIFIKALQSRVVETRDFPYKFSYCFWWGLRNISSLGSNLDTSPFIGEVLFAVFISIFGLILFSLLVGNMQKYLQNLQSIAARIEEEREKRKNTELWMSHRILPEHLRIRIRQYRQYKWKKTKGVDENGLINDLPKDLRRDIKRHLRLALLMRMPVFERFDELLLDAICDRLKPVLYTEGSYIVREGDPIDEMLFIVRGKLRSISTDGGRTGFLNLIYLEAGDFYGEELLPWALESQSSPFHPISTRTISAVTEVEASALTAHDLKSLISYHFSHPLPRKQLVQSLRLWSQKWRTWAACFIQVAWWRYQKRKQNKALQEAEDRLRDALSKAVGTSTTLGATNYASRFAANMLRILRRNGGSRARLPQRSWFALPPKPRDPQLTI* | 1374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 18026056 | 18036291 | - | Vvi15g732 | Vvi15g732 | 777424 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi15g732 | 1373 | Coils | Coil | 644 | 664 | - | - | |
Vvi15g732 | 1373 | Pfam | Ion transport protein | 743 | 1068 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Vvi15g732 | 1373 | Pfam | Ion transport protein | 92 | 418 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Vvi15g732 | 1373 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 491 | 575 | IPR000595 | - | |
Vvi15g732 | 1373 | SUPERFAMILY | Voltage-gated potassium channels | 737 | 1067 | - | - | |
Vvi15g732 | 1373 | Pfam | Cyclic nucleotide-binding domain | 1165 | 1259 | IPR000595 | - | |
Vvi15g732 | 1373 | Pfam | Cyclic nucleotide-binding domain | 511 | 602 | IPR000595 | - | |
Vvi15g732 | 1373 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 1145 | 1258 | IPR000595 | - | |
Vvi15g732 | 1373 | CDD | CAP_ED | 1145 | 1258 | IPR000595 | - | |
Vvi15g732 | 1373 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 729 | 1372 | - | - | |
Vvi15g732 | 1373 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 5 | 719 | - | - | |
Vvi15g732 | 1373 | Gene3D | Helix hairpin bin | 418 | 482 | - | - | |
Vvi15g732 | 1373 | Gene3D | Helix hairpin bin | 1073 | 1135 | - | - | |
Vvi15g732 | 1373 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 10-RELATED | 729 | 1372 | - | - | |
Vvi15g732 | 1373 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 10-RELATED | 5 | 719 | - | - | |
Vvi15g732 | 1373 | SUPERFAMILY | cAMP-binding domain-like | 1075 | 1261 | IPR018490 | - | |
Vvi15g732 | 1373 | CDD | CAP_ED | 491 | 623 | IPR000595 | - | |
Vvi15g732 | 1373 | SUPERFAMILY | Voltage-gated potassium channels | 83 | 413 | - | - | |
Vvi15g732 | 1373 | SMART | cnmp_10 | 491 | 622 | IPR000595 | - | |
Vvi15g732 | 1373 | SMART | cnmp_10 | 1145 | 1276 | IPR000595 | - | |
Vvi15g732 | 1373 | Coils | Coil | 1059 | 1083 | - | - | |
Vvi15g732 | 1373 | Gene3D | - | 109 | 415 | - | - | |
Vvi15g732 | 1373 | Gene3D | - | 749 | 1067 | - | - | |
Vvi15g732 | 1373 | Gene3D | Jelly Rolls | 489 | 608 | IPR014710 | - | |
Vvi15g732 | 1373 | Gene3D | Jelly Rolls | 1143 | 1261 | IPR014710 | - | |
Vvi15g732 | 1373 | Coils | Coil | 1299 | 1319 | - | - | |
Vvi15g732 | 1373 | SUPERFAMILY | cAMP-binding domain-like | 421 | 607 | IPR018490 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi15g732 | K05391 | - | vvi:100260148 | 1407.12 |