Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g747 ATGGAAATGGCCAGGGAGTGGGAGCACAACACCCTAATCAATGAGCTAACTCAAGGGAGAGAGATGGCAAACCAGCTCAAAAACCATCTCACTCCATCATCATCCCGCGAAACGCGAGAGTTCTTAGTCGAGAAGATACTTTCTTCCTATGAAAAAGCGCTTTCAATGCTGAAATGTGGTGGTTTTGTGAGCGAATTGCCTCATTCCCTTCCCGGAAGTAGCCCAAGGAGCGAAGGGTCCAACCAAGATTTCAAGGACCAAGCAGGCAAAGATGTCTTCAAGAAGAGAAAAACATTGCCTAGGTGGACCGAGCAAGTGCGCGTCACCATCGGAACAGTGCCAGAAGGCCCTCTTGACGATGGGTACAGCTGGAGAAAATATGGACAGAAAGACATCTTGGGAGCCAATTTTCCAAGGGGATACTTCAGATGTACTCATAGGCATGCGCAGGGCTGTTTGGCAACCAAACAAGTTCAAAGATCAGATGAAGACCCCTCAATCTATGAGGTAACATACCGAGGAAGGCATACTTGTATTCAAGGCTCTCGTGTAGCGCCGGCCTCGGAGGCTGAACAAATAGTGTCGGGCTTTGGGACAGGCCTTAAGGTTAAGACTGAGGACTTGGACAGTAGGGAGAAGATATTCCCATCATTCTCCTTCCCTTTGTCAGATTCGGAAACCGTGGACAAAATTTTTGCTGAATCCATGATTGAAAACAGCTTGATGGGCGGTTTTTCCCCGTCGTTTTTGTCTCCGGCCACATCTGAATCCAACTATTTTCCGGTGTCGCCATGCCAGATGAACAGCTTTGGAATGGGGCACAGTGTGTACACTACAGAATCAGACCTGACGGAGAACATCTCAGCCCCAACTTCAGTCACCAATTCGCCTATTGGGGACTACAGTTTCCCGCTGGATCCTATCCAGGACAGCATTCCAAGTGAGACGGAACCCATAAAGATGGTACTTCAAAGTCTCCCATGGTGCTGTCCTAGAGAATTTTCCTTCTCTATAGATTCCTTCTTGAATATAGTGTCTCTCTCTATAGATTCCTTCTCCTTAAATTATCTTCAAAGTGATTAA 1083 47.09 MEMAREWEHNTLINELTQGREMANQLKNHLTPSSSRETREFLVEKILSSYEKALSMLKCGGFVSELPHSLPGSSPRSEGSNQDFKDQAGKDVFKKRKTLPRWTEQVRVTIGTVPEGPLDDGYSWRKYGQKDILGANFPRGYFRCTHRHAQGCLATKQVQRSDEDPSIYEVTYRGRHTCIQGSRVAPASEAEQIVSGFGTGLKVKTEDLDSREKIFPSFSFPLSDSETVDKIFAESMIENSLMGGFSPSFLSPATSESNYFPVSPCQMNSFGMGHSVYTTESDLTENISAPTSVTNSPIGDYSFPLDPIQDSIPSETEPIKMVLQSLPWCCPREFSFSIDSFLNIVSLSIDSFSLNYLQSD* 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18191020 18193489 + Vvi15g747 Vvi15g747 777439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g747 360 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 312 IPR044810 GO:0003700
Vvi15g747 360 MobiDBLite consensus disorder prediction 68 90 - -
Vvi15g747 360 Gene3D WRKY domain 103 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi15g747 360 ProSiteProfiles WRKY domain profile. 113 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi15g747 360 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi15g747 360 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi15g747 360 SUPERFAMILY WRKY DNA-binding domain 115 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi15g747 360 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 312 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g747 Vvi16g867 ECH
Vvi2g118 Vvi15g747 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14094 PF03106 WRKY 7.60E-27 CL0274 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g747 - - vvi:100263619 614.764