Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g815 ATGTCTATGGAGTCGAGCGCTGGTTCAGTTGAAGGGAATATCAGAGGAGTGTCGACTCATGGTGGACGGTATGTTCAGTACAATGTGTATGGGAACCTCTTCGAAGTTTCTAGGAAGTACGTGCCGCCAATTCGGCCTGTGGGTCGTGGTGCTTATGGTATCGTGTGCGCTGCGATGAACTCAGAGACACGGGAGGAAGTTGCCATTAAGAAGATTGGTAATGCATTTGATAATAGGATAGATGCCAAACGGACATTACGGGAAATTAAGCTTCTTCGCCACATGGATCATGAAAATGTTATTGTCTTGAAAGACATCATACGGCCACCTAAGAGGGAGAACTTCAATGATGTCTACATTGTTTATGAATTAATGGACACTGATCTGCATCAGATAATACGTTCCAACCAACCACTGAATGATGACCACTGCCGGTACTTCCTGTATCAGGTGTTACGAGGACTTAAATATGTACACTCAGCAAATGTCTTGCATCGTGATTTGAAGCCGAGTAATTTGCTTCTGAATGCAAATTGTGATCTTAAGATTGGGGATTTTGGACTTGCGAGGACGACATCTGAAACAGACTTCATGACTGAGTATGTTGTTACCCGATGGTATCGTGCACCAGAATTGCTCCTTAATTGTTCAGAATACACTGCGGCAATTGATATTTGGTCAGTGGGTTGTATCCTTGGAGAAATCATGACAAGGCAACCTCTGTTTCCTGGCAGAGATTATGTCCATCAGCTGAGACTTATCACAGAGCTTATAGGTTCACCTGATGACTCTAGCCTTGGGTTTCTTCGAAGTGATAATGCCCGAAGATATGTTAGGCAGCTACCACAATACCCGAGACAACAATTTCAGGCTAGATTTCCTAATATGTCTCCTGGAGCTATTGATTTGCTAGAAAAAATGCTTGTATTTGATCCAAACAGGCGCATTACAGTTGAAGGGGCACTGTCTCATCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCCGTTTGTCCAAGGCCTTTTGTTTTTGATTTCGAGCAACCATCATTTACTGAAGAGAATATCAAAGAACTCATCTGGAGGGAATCCGTAAAATTCAATCCAGACCCACCAGTTCATTGA 1128 43.17 MSMESSAGSVEGNIRGVSTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVIVLKDIIRPPKRENFNDVYIVYELMDTDLHQIIRSNQPLNDDHCRYFLYQVLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGRDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYPRQQFQARFPNMSPGAIDLLEKMLVFDPNRRITVEGALSHPYLAPLHDINEEPVCPRPFVFDFEQPSFTEENIKELIWRESVKFNPDPPVH* 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18821559 18826926 - Vvi15g815 Vvi15g815 777507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g815 375 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g815 375 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
Vvi15g815 375 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Vvi15g815 375 CDD STKc_TEY_MAPK 34 370 - -
Vvi15g815 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 373 - -
Vvi15g815 375 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi15g815 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 16 373 - -
Vvi15g815 375 SUPERFAMILY Protein kinase-like (PK-like) 44 334 IPR011009 -
Vvi15g815 375 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vvi15g815 375 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
Vvi15g815 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Vvi15g815 375 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76253 PF00069 Pkinase 1.90E-70 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g815 K20600 - vvi:100852927 770.385