Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g849 ATGGACGTGTTTTGGGCTTCGCTGTTTTTTATGGCGATCACCGCTTATCTGCTGTGGTTCACCTTCATCTCACGGTCGTTGAGGGGTCCACGTGTCTGGCCTTTATTGGGCAGCTTACCAGGCTTGATCGAGAACAGTGAACGCATGCATGAATGGATCGCTGAAAATCTACGCGCGTGTGGCGGCACGTACCAAACATGCATCTGCGCCGTCCCTTTCTTGGCGCGAAAGCAAGGGCTCGTGACGGTCACATGCGACCCGAAGAATCTGGAGCATATATTGAAGACCCGGTTCGATAATTACCCTAAGGGTCCCACGTGGCAAGGTGTATTTCATGATCTGCTCGGGGAAGGGATCTTCAATTCTGATGGCGACACGTGGCTGTTTCAGAGGAAGACCGCCGCACTGGAATTTACCACCCGGACGCTGCGTCAGGCCATGGCTCGCTGGGTCAGTCGAGCCATCAAGCACAGGTTCTGCCCCATTCTCAGGGCGGCTCAGCTAGAAGCCAAGCCAGTTGATCTTCAGGACCTTTTGCTTCGGATCACGTTCGATAACATTTGCGGCTTGACGTTTGGGATGGACCCGCAAACCCTAGCTCCAGGCCTCCCTGAAAACAGCTTCGCCTCTGCTTTTGACCGAGCCACCGAAGCCAGCCTCCAGCGATTTATTTTGCCTGAGGTTATGTGGAAGCTGAAGAAGTGGCTTGGGTTGGGCATGGAGGTCAGCTTGAGCCGAAGCATTGTACACGTGGAGAATTACCTGTCCAAAGTCATCAATACACGTAAGGTGGAGCTGCTGAGTCAGCAAAAAGACGGAAACCCCCACGACGACTTGCTCTCAAGATTTATGAAGAAAAAGGAATCCTACTCAGACTCCTTCCTCCAACACGTGGCACTCAACTTCATCCTAGCTGGACGTGACACGTCATCACCGTTAGAGTTTGAAGAGCTGGACCGTTTGATATACCTCAAAGCCGCACTCTCCGAGACTCTCCGGCTCTACCCGTCGGTGCCGGAGGATTCAAAGCATGTTGTCGCCGACGACATATTACCGGACGGCACTTTCGTCCCGGCGGGATCATCAATCACGTACTCAGTATATTCATCGGGTAGGATGAAATCCACGTGGGGTGAAGACTGGCCCGAGTTCAGGCCTGAGAGGTGGCTATCGGCCGACTGCCAGCGATTCATATTGCACGACCAATACAAGTTTGTGGCGTTCAATGCGGGGCCGAGGATTTGTTTGGGGAAGGACTTGGCTTACTTGCAAATGAAGTCGATAGCCGCGTCGGTGTTGCTGCGCCACCGCCTCACGGTGGTTGCCGGCCACCGGGTGGAGCAGAAGATGTCGCTGACGTTGTTCATGAAGTATGGGCTCAAGGTTAACGTGCATGAAAGAGATTTAACGGCAGTTGTGGACGGCGTTAGGAACGAGAAAGCAAGTGAGGTGTGTGGCGAGGAAGCTGTTAGAGTTAAATGTAACGGTAACTGTCACGCCAGTGGTTCGGTTGTTGTTGGGGGTAGCGACGTGCGGCTCGCAGCCCAACAGTTTTTAAGGCCCAATTACGCTTGA 1575 53.4 MDVFWASLFFMAITAYLLWFTFISRSLRGPRVWPLLGSLPGLIENSERMHEWIAENLRACGGTYQTCICAVPFLARKQGLVTVTCDPKNLEHILKTRFDNYPKGPTWQGVFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILRAAQLEAKPVDLQDLLLRITFDNICGLTFGMDPQTLAPGLPENSFASAFDRATEASLQRFILPEVMWKLKKWLGLGMEVSLSRSIVHVENYLSKVINTRKVELLSQQKDGNPHDDLLSRFMKKKESYSDSFLQHVALNFILAGRDTSSPLEFEELDRLIYLKAALSETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSITYSVYSSGRMKSTWGEDWPEFRPERWLSADCQRFILHDQYKFVAFNAGPRICLGKDLAYLQMKSIAASVLLRHRLTVVAGHRVEQKMSLTLFMKYGLKVNVHERDLTAVVDGVRNEKASEVCGEEAVRVKCNGNCHASGSVVVGGSDVRLAAQQFLRPNYA* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19173600 19175767 + Vvi15g849 Vvi15g849 777541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g849 524 SUPERFAMILY Cytochrome P450 27 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 Gene3D Cytochrome P450 312 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PANTHER CYTOCHROME P450 86A7 8 311 - -
Vvi15g849 524 PANTHER CYTOCHROME P450 86A7 311 469 - -
Vvi15g849 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Vvi15g849 524 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PRINTS E-class P450 group I signature 325 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 Coils Coil 523 524 - -
Vvi15g849 524 PANTHER CYTOCHROME P450 311 469 - -
Vvi15g849 524 PANTHER CYTOCHROME P450 8 311 - -
Vvi15g849 524 Pfam Cytochrome P450 28 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 Pfam Cytochrome P450 313 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi15g849 524 Gene3D Cytochrome P450 24 311 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g5 Vvi15g849 ECH
Vvi2g305 Vvi15g849 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g849 K15398 - vvi:100249915 1009.21