Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g14 ATGAGAGAAATGTATTGGGGTTGGTCTGTAGTGGCAGCCACCCTCTTGTTCATTTGGTTTGCTGCCAAGTTTGTGATCAACAAGAAGAAGAATGTGGGCGGAGAAAGATCATCAGTAGTGTACAAAATGCCGCCGGGGAGTAGAGGTTGGCCTTTGATCGGCCATAGCTTAAGTTGGTACAACTCGGTTGCAGGTCCTCATCCTCCTCGCTTTGTTCACCAGCAGGCTCTAAAGTTTGGGAAGATATTTTCTTGTAGTCTGTTTGGTAAATGGGCAGTTGTGTCTGCAGACTCGGGCTTTAACAGATTCATCATGCAAAATGAAGGCAAATTGTTCCAGTCCAGTTACCCGAAATCTTTCAGAGATTTGGTTGGGAAAAATGGGGTGATTACAGTGCAAGGAGAGCAACAAAGGAAACTGCATAGCATCGCATCCAATATGATGCGGTTGGAGAAGCTTAAGTTTCATTTTTTGAAGGATATTCAAATGATTATGCTGCAAACCTTGGGCAATTTTGCTAACAATCAAGTTATTCTCCTTCAGGATGTTTGCAGAAAGGTGGCCATTAACCTGATGGTGAATCAACTGCTGGGTGTGTCTACTGAGTCTGAAATCAACCAAATGGCTCAACTGTTCTCTGATTTCGTTGATGGGTGTCTCTCTATTCCAATCAACTTTCCGGGTTTCGCTTTCCACACTGCCATGAAGGCAAGGGAGGCTATAATAAGCAAAATCAACAGGATAATACAGATGCGCCGACAGCAAAACTTATCATCGAAAGAAGGTGATGGTGTACTTGGAAGACTAATAGAGGAAGAAAGCTTGGGTGATGATGCAGTAGCTGACTTCATTATCAATCTTCTGTTTGCTGGGAATGAAACAACAGCTAAAACCATGCTCTTTGCTGTTTATTTCCTCACTCACTGCCCTAGGGCAATGAAGCAACTACTGGTAATTATAAGCAGGCCTATCAATGGAGAAGAAGAGCTACTGACATGGCAAGATTATAAAGCAATGCCTTTCACTCAATGTGTGATTGATGAAACACTTAGACTTGGGGGCATTGCAATATGGTTGATGAGGGAGGCAAAAGAAGATGTTAAATACCAAGATTATGTGATTCCCAAAGGGTGCTTTGTGGTACCCTTTCTTTCAGCAGTGCATTTGGATGAGAATATATACAAGGGAGCTCTCTCCTTCAATCCTTGGAGATGGATGGAACCTGAAAATCAAGAAAAAAGAAATTGGAGGAGCAGTCCATTATACAGTCCATTTGGAGGAGGGGCTAGATTTTGTCCAGGAGCAGAGTTGGCTCGTCTTCAAATTGCACTCTTTCTCCACTACTTTGTTACCACTTACAGGTGGAGGCAGATGAAAGAAGATAGGATGTCATTTTTCCCATCTGCTCGTTTAGTGAATGGCTTCCAAATTTGCTTAACCAGAAGCAGCTGCCTAGTTTGA 1461 42.85 MREMYWGWSVVAATLLFIWFAAKFVINKKKNVGGERSSVVYKMPPGSRGWPLIGHSLSWYNSVAGPHPPRFVHQQALKFGKIFSCSLFGKWAVVSADSGFNRFIMQNEGKLFQSSYPKSFRDLVGKNGVITVQGEQQRKLHSIASNMMRLEKLKFHFLKDIQMIMLQTLGNFANNQVILLQDVCRKVAINLMVNQLLGVSTESEINQMAQLFSDFVDGCLSIPINFPGFAFHTAMKAREAIISKINRIIQMRRQQNLSSKEGDGVLGRLIEEESLGDDAVADFIINLLFAGNETTAKTMLFAVYFLTHCPRAMKQLLVIISRPINGEEELLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDVKYQDYVIPKGCFVVPFLSAVHLDENIYKGALSFNPWRWMEPENQEKRNWRSSPLYSPFGGGARFCPGAELARLQIALFLHYFVTTYRWRQMKEDRMSFFPSARLVNGFQICLTRSSCLV* 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 140768 143178 - Vvi16g14 Vvi16g14 777663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g14 486 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Vvi16g14 486 PANTHER CYTOCHROME P450 26 29 480 - -
Vvi16g14 486 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 29 480 - -
Vvi16g14 486 SUPERFAMILY Cytochrome P450 41 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 Gene3D Cytochrome P450 35 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 70 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 281 307 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 372 386 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 416 432 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g14 486 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g14 - - vvi:100242623 979.548