Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g290 ATGCCAGGCATACCTTTAGTGGCTCGTGAAACAATCTATTCTAGAAGTGCAGATCAGATGTGCCGCCAAGATTCTCGTGTGCACTTATCTGCAGAGGAGGAAATTGCAGCAGAAGAGTCTTTATCCATTTACTGCAAGCCTGTCGAACTTTATAACATTCTTCAACGACGTGCTGTAGGAAATCCATCATTTCTTCAAAGATGTTTGCGATACAAAATACAAGCAAAGCACAAAAGAAGGATTCAAATGACAATTTCTCTACCAGGGTCTACATATGATGGAGTACAAGCTCAGAGTCCATTTCCTTTGTATATCTTGTTAGCAAGACCAATATCTGACATTGCACTTGCAGAGTACCCTGCAGTTTATCGGTTCAATCGAGCATGCATTTTGACCAGTTCAACCAGAGTTGATGGTAGTCATCAAGCTCAAGCAAATTTTATTCTCCCTGATATTAGTAAGCTAGCAATGGAATCCAAATCTGGGTCACTAACAATCTTGATTGTTAAGTGTGCTGAAAGCAAGGAGTCAATTAGTGGATTTGGTTTACCCAAGGACATTATGGACATGGCACCTTTTTCAACAAATGTTGGAGGACACTGCCTGTGGGGCAAGGTACCAATGGAATCGCTCTATTTGTCATGGAAAATGTCTCCAAACCTGAGTTTAGGGCAGAGAGCTGAGATCATATCAACTGTTGACTTGCATCCATGCTTCATGAAGTCAAGTTGTTTGGACGACGACAAGTGCATTTCTTTTCAAAATCCTTATAATTCTGGGACTCTGAGTAAAGCCCAGCAATTTCAAGTTATCATTTCTGCGGAAGAGGTTGGGGCCAAAGATAAATCCCCTTACAATTCATACACATACACTGACGTTCCTACTTCATCATTATCTGATATTATTCGGTTGAGAACTGGAAACGTCATTTTCAACTATAGGTACTACAATAATAAGTTGCAAAGAACCGAAGTGACGGAAGACTTCTCCTGTCCCTTCTGCTTGGTCAAATGTGCAAGCTTCAAGGGTCTGAGATATCACTTGTCCTCATCACATGATCTATTCAACTTTGAGTTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTATCTGTGAAAACTGATATTTGGAGAACCGAGATTGTTGCAGATGGAGTTGACCCTAAGCAACAAACTTTTTCCTTCTGTTCAAAGCCACTAAGACGAAGAAGATCGAAGAATCTAGCTCAAAATGCAAAGCATGTACATCCACTCACCCTGGAGTCAGACTTGCATGCTGTAGTCAGTAATCTGGGGAAGGCAAATGATGCTCATTCCAGTAAAGGTGAAAGGGCTCGTATTTTAAGTGGGAATGATTCACAGGCTGTCCCAGAATGTGTTCAATCAGGCCCTGCAAGCAATCTTGCACCACCTGCCTTGCTACAGTTTGCAAAGACAAGAAAGTTGTCAATCGAACGCTCTGACCCTAGAAGCCGTGCACTCCTGCAGAAACGACAGTTCTTTCACTCGCATAGAGCTCAGCCGATGGGCATGGAACAAGTATTATCTGATCGGGATAGTGAAGATGAAGTTGATGATGATGTTGCAGATTTTGAAGACCGAAGGATGCTTGATGATTTTGTGGATGTGACTAAAGATGAGAAGCAACTAATGCATCTATGGAACTCTTTTGTAAGGAAGCAACGGGTGTTAGCAGATGGGCACATTCCTTGGGCATGTGAGGCATTTTCAAGATTGCATGGACATGATCTTGCCCAGGCCCCAGCGCTGAGTTGGTGTTGGAGATTATTCATGATCAAACTGTGGAATCACGGTCTCCTCGATGCACGCGCCATGAACAATTGTAATAAAATTATCGAACAGTGCAACAAAAACCAGGATTCGGATCCTAAAACAAGCTAA 1902 42.17 MPGIPLVARETIYSRSADQMCRQDSRVHLSAEEEIAAEESLSIYCKPVELYNILQRRAVGNPSFLQRCLRYKIQAKHKRRIQMTISLPGSTYDGVQAQSPFPLYILLARPISDIALAEYPAVYRFNRACILTSSTRVDGSHQAQANFILPDISKLAMESKSGSLTILIVKCAESKESISGFGLPKDIMDMAPFSTNVGGHCLWGKVPMESLYLSWKMSPNLSLGQRAEIISTVDLHPCFMKSSCLDDDKCISFQNPYNSGTLSKAQQFQVIISAEEVGAKDKSPYNSYTYTDVPTSSLSDIIRLRTGNVIFNYRYYNNKLQRTEVTEDFSCPFCLVKCASFKGLRYHLSSSHDLFNFEFWVTEEYQAVNVSVKTDIWRTEIVADGVDPKQQTFSFCSKPLRRRRSKNLAQNAKHVHPLTLESDLHAVVSNLGKANDAHSSKGERARILSGNDSQAVPECVQSGPASNLAPPALLQFAKTRKLSIERSDPRSRALLQKRQFFHSHRAQPMGMEQVLSDRDSEDEVDDDVADFEDRRMLDDFVDVTKDEKQLMHLWNSFVRKQRVLADGHIPWACEAFSRLHGHDLAQAPALSWCWRLFMIKLWNHGLLDARAMNNCNKIIEQCNKNQDSDPKTS* 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6368528 6436142 - Vvi16g290 Vvi16g290 777939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g290 633 Pfam VEFS-Box of polycomb protein 482 617 IPR019135 -
Vvi16g290 633 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 20 632 - -
Vvi16g290 633 PANTHER POLYCOMB GROUP PROTEIN 20 632 - -
Vvi16g290 633 MobiDBLite consensus disorder prediction 434 464 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g290 - - vvi:100252876 1238.02