Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g337 ATGGTCAAAATAGCACCATTATTATTTGATTGGACTGTGGATAAGATTAATAATTTTATTGGGCAAGATTCTGATTCAAAAGTTTTAATCGAGGTCCTGGATATTTATGGATTTGAGAGTTTCAAGACAAGCAGTTTTGAGCAATTTTGTATCAATTTGGCAAAGGAGAAACTGCAGCAACATTTCAATCAACGTGTATTCAAGATGGAACAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATAGATTATGTTGATAATCAAGATATTCTTGATCTCATTGAAAAGGAACTTGCTAACATGAAGAAGCTGAACACAAGCTGA 330 32.12 MVKIAPLLFDWTVDKINNFIGQDSDSKVLIEVLDIYGFESFKTSSFEQFCINLAKEKLQQHFNQRVFKMEQEEYTKEEIDWSYIDYVDNQDILDLIEKELANMKKLNTS* 110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8500168 8503034 - Vvi16g337 Vvi16g337 777986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g337 109 PANTHER MYOSIN 8 99 - -
Vvi16g337 109 PRINTS Myosin heavy chain signature 29 57 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g337 109 PRINTS Myosin heavy chain signature 82 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g337 109 PANTHER MYOSIN-7 8 99 - -
Vvi16g337 109 Gene3D - 41 102 - -
Vvi16g337 109 Pfam Myosin head (motor domain) 8 99 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g337 109 Gene3D Myosin VI head, motor domain, U50 subdomain 8 19 - -
Vvi16g337 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 99 IPR027417 -
Vvi16g337 109 ProSiteProfiles Myosin motor domain profile. 1 109 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi16g337 109 Gene3D Kinesin motor domain 20 40 IPR036961 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g337 K10357 - vvi:100259730 172.94