Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g371 ATGATTTTGTGTCCTTGTGCATTATGGATATCTTTTATACCTAAAAAGCCTATGGGAACATTAACCAATACTTATTTCATACTTGATGAAAAATTACAGGAGAGTTGCAGGAAGGCTTCTATTATTTGTCCTGAAAGTAAGATTGAAGCTTTAGGAGGCTGTAAGAGGACCCCAGAGCAACTATGTGCCCAATTAAATAGGCTGAATCAGAGACTTCAAAGTGAAAGCCAGAGATATGCTGAACCTATTGAGGATCTTAGAATGATTTATGACAAAAAAGAGTACACAATTTTGAGAAAACAGCAAACTTATGAAGCTTTTAGAGAGAAATTGAATGCATGTAAGGAAGCCTTAGACCTACGATGGAGCAAGTTGCAGAGGAATGCCACTCTTCTGAAGCGCCAGTTGACTTGGCAATTTAATGCTCACTTAAGAAAGAAAGGGATTAGTGGGCACATTAAAGTTAGTTATGAAGAGAAAAACCCTATCAGTGGAGGTAAGTGA 504 37.5 MILCPCALWISFIPKKPMGTLTNTYFILDEKLQESCRKASIICPESKIEALGGCKRTPEQLCAQLNRLNQRLQSESQRYAEPIEDLRMIYDKKEYTILRKQQTYEAFREKLNACKEALDLRWSKLQRNATLLKRQLTWQFNAHLRKKGISGHIKVSYEEKNPISGGK* 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9914907 9918414 + Vvi16g371 Vvi16g371 778020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g371 167 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 24 160 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Vvi16g371 167 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 24 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g371 K22804 - vvi:109124166 276.559