Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g42 ATGGAGATATGGGTCTTCCTCTTCGTCGTCTCCCTCTGCATTGCTTCTCTCCTCAAATCTCTCCATGATTTCTTCTTCCCAAAGCTCAATCTCCCACCAGGACCCGCTGCCTTTCCTCTCATCGGAAACCTCCACTGGCTCGGCCCATCCTTCGCCGACCTCGAACCCATACTTCGAAATTTACACGCCAAGTACGGCCCAATCCTCACTCTCCGAATCGGCTCTCGCCCGGCCATCTTCATCTCCGAGAACTCCCTCGCCCACCAGGCCTTGGTGCAAAACGGAGCCGTTTTCGCCGACCGTCCTGCGGCGCTTCCGGCCAGTAGAATTCTCCACTCTTCCCGGGTGAGAAGCTACTCCCACGCACGGAAGTGGGTGCTGGAGATTCTGGTCTCTCGGCTTAGAGGCCACTCCGACGGATTTGTCCCCGTCCGAATAATGGATCACTTTCAATACGCCATGTTTTGCCTACTGGTGCTCATGTGTTTCGGGGACAAGCTCGAGGAGAAGCAAATTCAGGAGATTGAGATGATTCAACGAAAGTTGTTGTTGGCGTTCCGTGGATTGAATAGGCTCAATTTGTGGCCGAGGATGGGGAAGATATTATTTCGAAAAAGGTGGGAGGAGTGGCTTAATTTGCGCAAGGATCAGGAAGCGATTCTTCTGCCGCACATAAGAGCCAGACAGCGGCTTAAGCAGGAAACGCAAAACAAACAAGAAGATGATTCATCTTCATCTTCAAAGGACTATGTCTTGTCGTATGTGGACACTTTGCTGGATCTGCAGCTGCCGGAGGAGAAGAGGAAGCTTAATGAAGGAGAGATGGTGACGCTGTGCTCGGAGTTTCTCAGTGCCGGAACTGACACCACCTCCACTGCACTGCAGTGGATCATGGCGAACCTGGTGAAGGCCCCCCATATTCAGGCCAGGCTTTTCGAGGAGATTAGTGGGCTTTGA 957 52.66 MEIWVFLFVVSLCIASLLKSLHDFFFPKLNLPPGPAAFPLIGNLHWLGPSFADLEPILRNLHAKYGPILTLRIGSRPAIFISENSLAHQALVQNGAVFADRPAALPASRILHSSRVRSYSHARKWVLEILVSRLRGHSDGFVPVRIMDHFQYAMFCLLVLMCFGDKLEEKQIQEIEMIQRKLLLAFRGLNRLNLWPRMGKILFRKRWEEWLNLRKDQEAILLPHIRARQRLKQETQNKQEDDSSSSSKDYVLSYVDTLLDLQLPEEKRKLNEGEMVTLCSEFLSAGTDTTSTALQWIMANLVKAPHIQARLFEEISGL* 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 503394 504575 + Vvi16g42 Vvi16g42 777691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g42 318 Gene3D Cytochrome P450 27 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 Pfam Cytochrome P450 32 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 Pfam Cytochrome P450 118 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 PANTHER CYTOCHROME P450 5 110 - -
Vvi16g42 318 PANTHER CYTOCHROME P450 107 317 - -
Vvi16g42 318 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 110 - -
Vvi16g42 318 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 107 317 - -
Vvi16g42 318 SUPERFAMILY Cytochrome P450 24 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 PRINTS E-class P450 group I signature 294 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g42 318 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g42 K24184 - vvi:109121466 600.127