Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g43 ATGGAGACATGGGTCTACAACATCGTCATCTCCCTCTGCGTTGCTGCTTTGCTCAAGTCTCTTTATGATTTCATCTTTCCAAAACTGAACCTACCTCCAGGACCCACCACGGTTCCTTTTGTGGGGAACCTGCTATGGCTCCTTAAATCCTTCTCAGAGCTTGAACCAATCCTCCGAAACCTCCACGCCAAGTATGGACCCATCGTCACCCTCCAAATCGGCTCTCGTCCGGCCATCTTCGTCTCCGCCAACTCCCTCGCCCACCGGACCTTGTCAGGTGAGGCACTTGAGGAGAAGCAGATTCAAGAGATTGAGACGATTCAAAGAATATTGTTGTTGGGTTTTCCTCGCTTCAATATATTAAACTTCTGGCCTAGGGTGGGAAAGCAACAAGACGGCCTTGAATCAGATTCGAAACTAAATGATGGAGAGATGCTTTTGGAGGAGATTAGTGGGGTTATGGGGGAAGGGAAGGAAGAGGTGGAGGAGGAAGATTTGCAGAAGATGCCATACTTGAAGGCAGTCATCTTGGAAGGTCTTAGGCGGCATCCTCCAGGACACTTTGTGTTGCCTCATTCAGTGACCCAAGATATAACCTTTGAAGGGTATGTTATACCCAAGAACGCCTCTCTCAATTTCATGGTATCAGAGATGAATTGGAACCCCAAGATATGGGAAGATCCAATGGAGTTCAAGCCAGAGAGGTTCTTGAACAGCAAAGGCAATGGAGATGAAGTGTTTGATATTACTGGGAGCAGGGAGATTAAGATGATGCCGTTTGGTGCAGGAAGGAGGATATGTCCCGGCCATGGCCTAGCGATGCTGCATCTGGAGTCCACTTGTCTCCACGATGGAAATAAGGCAAAAGTAGATGGCTTTAGGAGACCACCACTGCACCAAAGTCCATCACTAGTTACTATAATCATCAATAATATGCCTGTCACAACAGCTTTGAATGTTAGAATGAGCTCTCTTATAATGTTTGGATCTGAAGCATATAATATTGTATATGTGAAAAGCTTACCAGTCATGTCCGTCAAGTTGGTTAGGACATATACAGATACCGAAATGTGTGGTAGAGGCACATGA 1089 46.19 METWVYNIVISLCVAALLKSLYDFIFPKLNLPPGPTTVPFVGNLLWLLKSFSELEPILRNLHAKYGPIVTLQIGSRPAIFVSANSLAHRTLSGEALEEKQIQEIETIQRILLLGFPRFNILNFWPRVGKQQDGLESDSKLNDGEMLLEEISGVMGEGKEEVEEEDLQKMPYLKAVILEGLRRHPPGHFVLPHSVTQDITFEGYVIPKNASLNFMVSEMNWNPKIWEDPMEFKPERFLNSKGNGDEVFDITGSREIKMMPFGAGRRICPGHGLAMLHLESTCLHDGNKAKVDGFRRPPLHQSPSLVTIIINNMPVTTALNVRMSSLIMFGSEAYNIVYVKSLPVMSVKLVRTYTDTEMCGRGT* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 504575 508957 + Vvi16g43 Vvi16g43 777692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g43 362 SUPERFAMILY Cytochrome P450 145 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g43 362 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 144 278 - -
Vvi16g43 362 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 91 - -
Vvi16g43 362 Pfam Cytochrome P450 32 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g43 362 Pfam Cytochrome P450 144 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g43 362 Gene3D Cytochrome P450 27 127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g43 362 SUPERFAMILY Cytochrome P450 22 94 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g43 362 PANTHER P450, PUTATIVE-RELATED 144 278 - -
Vvi16g43 362 PANTHER P450, PUTATIVE-RELATED 5 91 - -
Vvi16g43 362 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 260 269 IPR017972 GO:0005506|GO:0016705
Vvi16g43 362 Gene3D Cytochrome P450 144 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g43 K24184 - vvi:100240884 311.227