Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g43 | ATGGAGACATGGGTCTACAACATCGTCATCTCCCTCTGCGTTGCTGCTTTGCTCAAGTCTCTTTATGATTTCATCTTTCCAAAACTGAACCTACCTCCAGGACCCACCACGGTTCCTTTTGTGGGGAACCTGCTATGGCTCCTTAAATCCTTCTCAGAGCTTGAACCAATCCTCCGAAACCTCCACGCCAAGTATGGACCCATCGTCACCCTCCAAATCGGCTCTCGTCCGGCCATCTTCGTCTCCGCCAACTCCCTCGCCCACCGGACCTTGTCAGGTGAGGCACTTGAGGAGAAGCAGATTCAAGAGATTGAGACGATTCAAAGAATATTGTTGTTGGGTTTTCCTCGCTTCAATATATTAAACTTCTGGCCTAGGGTGGGAAAGCAACAAGACGGCCTTGAATCAGATTCGAAACTAAATGATGGAGAGATGCTTTTGGAGGAGATTAGTGGGGTTATGGGGGAAGGGAAGGAAGAGGTGGAGGAGGAAGATTTGCAGAAGATGCCATACTTGAAGGCAGTCATCTTGGAAGGTCTTAGGCGGCATCCTCCAGGACACTTTGTGTTGCCTCATTCAGTGACCCAAGATATAACCTTTGAAGGGTATGTTATACCCAAGAACGCCTCTCTCAATTTCATGGTATCAGAGATGAATTGGAACCCCAAGATATGGGAAGATCCAATGGAGTTCAAGCCAGAGAGGTTCTTGAACAGCAAAGGCAATGGAGATGAAGTGTTTGATATTACTGGGAGCAGGGAGATTAAGATGATGCCGTTTGGTGCAGGAAGGAGGATATGTCCCGGCCATGGCCTAGCGATGCTGCATCTGGAGTCCACTTGTCTCCACGATGGAAATAAGGCAAAAGTAGATGGCTTTAGGAGACCACCACTGCACCAAAGTCCATCACTAGTTACTATAATCATCAATAATATGCCTGTCACAACAGCTTTGAATGTTAGAATGAGCTCTCTTATAATGTTTGGATCTGAAGCATATAATATTGTATATGTGAAAAGCTTACCAGTCATGTCCGTCAAGTTGGTTAGGACATATACAGATACCGAAATGTGTGGTAGAGGCACATGA | 1089 | 46.19 | METWVYNIVISLCVAALLKSLYDFIFPKLNLPPGPTTVPFVGNLLWLLKSFSELEPILRNLHAKYGPIVTLQIGSRPAIFVSANSLAHRTLSGEALEEKQIQEIETIQRILLLGFPRFNILNFWPRVGKQQDGLESDSKLNDGEMLLEEISGVMGEGKEEVEEEDLQKMPYLKAVILEGLRRHPPGHFVLPHSVTQDITFEGYVIPKNASLNFMVSEMNWNPKIWEDPMEFKPERFLNSKGNGDEVFDITGSREIKMMPFGAGRRICPGHGLAMLHLESTCLHDGNKAKVDGFRRPPLHQSPSLVTIIINNMPVTTALNVRMSSLIMFGSEAYNIVYVKSLPVMSVKLVRTYTDTEMCGRGT* | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 504575 | 508957 | + | Vvi16g43 | Vvi16g43 | 777692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g43 | 362 | SUPERFAMILY | Cytochrome P450 | 145 | 278 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g43 | 362 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 144 | 278 | - | - | |
Vvi16g43 | 362 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 91 | - | - | |
Vvi16g43 | 362 | Pfam | Cytochrome P450 | 32 | 93 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g43 | 362 | Pfam | Cytochrome P450 | 144 | 279 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g43 | 362 | Gene3D | Cytochrome P450 | 27 | 127 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g43 | 362 | SUPERFAMILY | Cytochrome P450 | 22 | 94 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g43 | 362 | PANTHER | P450, PUTATIVE-RELATED | 144 | 278 | - | - | |
Vvi16g43 | 362 | PANTHER | P450, PUTATIVE-RELATED | 5 | 91 | - | - | |
Vvi16g43 | 362 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 260 | 269 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi16g43 | 362 | Gene3D | Cytochrome P450 | 144 | 283 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g43 | K24184 | - | vvi:100240884 | 311.227 |