Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g432 ATGAAGAAAACAATCATCACTGGCAGCAGGAGTGTTAGAGGAGGCTACACCACCTACAACTCTGCAACTGCTGGAATCCAAGGTCTTCGCTTTATCGCACGAGGCATTACATTCAAGAACACAGCCGGTCCAAAAAATGGCCAAGCAGTTGCACTCAGATCAAGTTCTGATCTCTCGGTCTTCTACCACTGTGCCTTCCAAGGGTACCAAGATACCCTCATGGTCCACTCCCAACGGCAATTCTATAGAGAATGCTACATCTATGGCACCATAGACTTCATATTTGGAAACGCAGCAGTAGTTTTCCAACAGTGCATGATCTTTGCTAGAAGGCCCCTACAAGGCCAAGCCAACGTGATCACAGCTCAGGGCCGGGGCGATCCATACCAAAACACTGGAATATCCATCCATAATTCTCGAATTCTTGCTGCATCTGACCTAAAGCCAGTGGTTGGATCATTCAAAACATACTTGGGAAGGCCATGGCAGCAATATTCACGAACCGTTATCCTCAAAACTTACCTTGATAGCTTGGTTGATCCATCAGGGTGGTCACCATGGGGCACTTCTAATTTTGCTCAGAGTACATTGTATTATGGTGAATATCAGAATTTTGGACCTTCTTCATCAACCAGAAATAGGGTGAAGTGGTCTGGTTATCATGTTATTACTAGTGCAACCGTGGCATCGCGGTTCACCGTCGGCAGCTTCATTGCTGGCCAGTCATGGCTGCCGGCCACCGGTGTGCCCTTCACTTCCGGGCTCTGA 768 47.79 MKKTIITGSRSVRGGYTTYNSATAGIQGLRFIARGITFKNTAGPKNGQAVALRSSSDLSVFYHCAFQGYQDTLMVHSQRQFYRECYIYGTIDFIFGNAAVVFQQCMIFARRPLQGQANVITAQGRGDPYQNTGISIHNSRILAASDLKPVVGSFKTYLGRPWQQYSRTVILKTYLDSLVDPSGWSPWGTSNFAQSTLYYGEYQNFGPSSSTRNRVKWSGYHVITSATVASRFTVGSFIAGQSWLPATGVPFTSGL* 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 12134007 12136119 - Vvi16g432 Vvi16g432 778081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g432 255 SUPERFAMILY Pectin lyase-like 2 254 IPR011050 -
Vvi16g432 255 ProSitePatterns Pectinesterase signature 2. 87 96 IPR033131 -
Vvi16g432 255 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED 1 254 - -
Vvi16g432 255 PANTHER PECTINESTERASE 1 254 - -
Vvi16g432 255 Pfam Pectinesterase 2 240 IPR000070 GO:0030599|GO:0042545
Vvi16g432 255 Gene3D - 1 255 IPR012334 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g432 K01051 - vvi:100246795 522.702