Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g479 ATGTGGCAAAACACACAGATAGATACAACTTCCACCACAGTGGAGTGGGCAATGGCAGAACTGCTTCAACACCCACAAACAATGCAAAAATTCCAAGAAGAATTGGAACAAGTAGTAGGAATTGAAAACATTGTAGAAGAGTCCCATCTCTTCCAACTCCCCTACTTGGATGCAGTCATAAAAGAAGCCCTCCGTTTGCATCCCCCGCTGCCCCTCCTAATCCCACACTCTCCTAGTACATCTTGCATCATTTCCGGGTACACTATCCCAAAGGGCTCGCGGATACTCGTCAATGCATGGGCGATGCAAAGGGACCCCGAGGCCTGGGGGCATCCACTGGAGTTTAAACCAGAGAGGTTCTTGGAAGATGCTGCAAGTGCTGACTACCAAGGCAACAATTTCAACTTTCTGCCATTTGGGTCAGGGAGGAGGATTTGTGCTGGCTTACCTCTAGCTGAGAGGATGCTGCCATATGCTGCCATATGGGAGGATAAGGTCGAATTGGAATGGAGTTTAGACGAGTCATTGTGGAGACGGTTGAATTGGTGGGAAAACCTAATATTTCTGATCTTTTTCCTGCTCTTGCATGCTGATGGAGAAGGCAAGAACAAGAGCAAGGAAAGCAAGGACTTCCTGCAGTTTATGTTGGAGCTGATGCATCAAGGAGATGATAAAACCTCGGTCTCCATCACCCAACTCAAGGCTTTGTTCATGGACATGGTCGTTGCTGCAACAGACACAACTTCCACCACAGTGGAGTGGGCAATGGCAGAACTGCTTCAACACCCACAAACAATGCAAAAAGTCCAAGAAGAATTGGAACAAGTAGTAGGAATTGAAAACATTGTAGAAGAGTCCCATCTCTTCCAACTCCCCTACTTGGATGCAGTCATAAAAGAAGCCCTCCGTTTGCATCCCCCGCTGCCCCTCCTAATCCCACACTCTCCTAGTACATCTTGCATCATTTCCGGGTACACTATCCCAAAGGGCTCGCGGATACTCGTCAATGCATGGGCGATGCAAAGGGACCCCGAGGCATGGGGGCATCCACTGGAGTTTAAACCAGAGAGGTTCTTGGAAGATGCTGCAAGTGCTGACTACCAAGGCAACAATTTCAACTTTCTGCCATTTGGGTCAGGGAGGAGGATTTGTGCTGGCTTACCTCTACTTGAGAGGATGCTGCCATATGTTTTGGCTTTTCTTTTACATTCCTTTGATTGGAAATTACTTGATGGCAGGACAAGGGTTGATTTTGAGGAAAGGTTGGCAATCGTTTCGAAGAAAAATGAGCCACTTCTCGCCATTCCAACTGCGAGATTGTCCAACTTATTTAGACTTCAATTTTTTAAGATACACGCTTTTGAAAGAACCCTATGA 1377 46.91 MWQNTQIDTTSTTVEWAMAELLQHPQTMQKFQEELEQVVGIENIVEESHLFQLPYLDAVIKEALRLHPPLPLLIPHSPSTSCIISGYTIPKGSRILVNAWAMQRDPEAWGHPLEFKPERFLEDAASADYQGNNFNFLPFGSGRRICAGLPLAERMLPYAAIWEDKVELEWSLDESLWRRLNWWENLIFLIFFLLLHADGEGKNKSKESKDFLQFMLELMHQGDDKTSVSITQLKALFMDMVVAATDTTSTTVEWAMAELLQHPQTMQKVQEELEQVVGIENIVEESHLFQLPYLDAVIKEALRLHPPLPLLIPHSPSTSCIISGYTIPKGSRILVNAWAMQRDPEAWGHPLEFKPERFLEDAASADYQGNNFNFLPFGSGRRICAGLPLLERMLPYVLAFLLHSFDWKLLDGRTRVDFEERLAIVSKKNEPLLAIPTARLSNLFRLQFFKIHAFERTL* 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 13549222 13575272 - Vvi16g479 Vvi16g479 778128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g479 458 PRINTS E-class P450 group I signature 232 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS E-class P450 group I signature 252 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS E-class P450 group I signature 295 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS E-class P450 group I signature 336 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS E-class P450 group I signature 374 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS E-class P450 group I signature 384 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 Pfam Cytochrome P450 8 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 Pfam Cytochrome P450 202 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 PANTHER OS08G0547900 PROTEIN 7 160 - -
Vvi16g479 458 PANTHER OS08G0547900 PROTEIN 196 443 - -
Vvi16g479 458 Gene3D Cytochrome P450 5 161 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 SUPERFAMILY Cytochrome P450 8 158 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 SUPERFAMILY Cytochrome P450 202 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g479 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Vvi16g479 458 PANTHER OS08G0547900 PROTEIN 7 160 - -
Vvi16g479 458 PANTHER OS08G0547900 PROTEIN 196 443 - -
Vvi16g479 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 377 386 IPR017972 GO:0005506|GO:0016705
Vvi16g479 458 Gene3D Cytochrome P450 166 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g479 - - vvi:109124179 423.705