Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g481 ATGCATCAAGGAGATGATAAAACCTCGGTCTCCATCACCCAGCTGAAGGCTTTGTTCATGGACATAGTCGTTGGTGCAACAGACACATCGTCCATCACAGTGGAGTGGGCAATGGCAGAACTGCTTCAACACCCACAGACAATGCAAAAAGCCCAAGAAGAATTGGAAAAAGTAGTAGGAAATGAGAACATTGTAGAAGAGTCTCATCTCTTCCAACTGCCCTACTTGGATGCAGTCATAAAGGAAACCCTCCGTTTGCATCCCCCGCTGCCGCTCCTAGTCCCACACTCTCCTAGTACGTCTTGCATCATTTCCGGGTACACTATCCCAAAGGGCTCGCGGATACTCTTCAATGCATGGGCAATGCAAAGAAACCCCGAGGTCTGGGAGCATCCATTGGAGTTTATACCAGAGAGGTTCTTGGAAGATGCTGCTAGTGCCGACTACAAAGGCAACAATTTCAACTTTATGCCATTTGGGTCAGGGAGGAGGATTTGTGCTGGCTTACCTCTAGCTGAAAAGATGCTGCTATATGTTTTGGCTTCTCTTTTACATTCCTTTGATTGGAAATTACCTGATGGGAGGACAAGCGTTGATTTGGAGGAGAGGTTTGGAATCGTTTTGAAGAAAAGTGAGCCACTTCTCGCCATTCCAACTGCAAGATTGTCCAATTAA 675 46.52 MHQGDDKTSVSITQLKALFMDIVVGATDTSSITVEWAMAELLQHPQTMQKAQEELEKVVGNENIVEESHLFQLPYLDAVIKETLRLHPPLPLLVPHSPSTSCIISGYTIPKGSRILFNAWAMQRNPEVWEHPLEFIPERFLEDAASADYKGNNFNFMPFGSGRRICAGLPLAEKMLLYVLASLLHSFDWKLPDGRTSVDLEERFGIVLKKSEPLLAIPTARLSN* 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 13618888 13620356 - Vvi16g481 Vvi16g481 778130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g481 224 Pfam Cytochrome P450 5 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PANTHER OS08G0547900 PROTEIN 1 224 - -
Vvi16g481 224 Gene3D Cytochrome P450 1 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS P450 superfamily signature 78 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS P450 superfamily signature 157 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS P450 superfamily signature 166 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 SUPERFAMILY Cytochrome P450 6 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PANTHER OS08G0547900 PROTEIN 1 224 - -
Vvi16g481 224 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 159 168 IPR017972 GO:0005506|GO:0016705
Vvi16g481 224 PRINTS E-class P450 group I signature 14 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS E-class P450 group I signature 34 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS E-class P450 group I signature 77 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS E-class P450 group I signature 118 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS E-class P450 group I signature 156 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g481 224 PRINTS E-class P450 group I signature 166 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g481 - - vvi:100242954 434.491