Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g499 ATGGAGGGAACAGAGGGTATAAATTCTGGGGTTACAGTGAAGGGTGAGGAAGCTCCGGACACCTACCGGGTGGCAGCGAGGAGCGAAAACCCTAGTGAATTTGGTGGGTCCACAATGACAGCTGTCGTGGCCATGCCAAGTTCGGAAATGAAGAAGAAGAGAGGGAGGCCGAGGAAGTATGGTCCCGGTGGGTCCCTGACGATGGCATTGTCGCCGATGCCAATATCCTCCTCAATTCCACTCACTGGAGAGTTCTCAGCATGGAAACGGGGTAGAGGGCGGCCGGTGGATTCATTCAAGAAGCAGCACAAATCAGAGTCAGAGAGTGCAGGTGAGCGGGTTGCATATTCTGTTGGTGCTAATTTCACACCCCATGTGATCACTGTTAATGCTGGCGAGGATGTTACTATGAAGATCATATCATTCTCACAACAAGGGTCCCGGGCTATTTGTATTCTTTCTGCAAATGGTGCAATTTCGAATGTTACCCTTCGTCAGCCTAACTCTTCTGGGGGTACTTTGACTTATGAGGGTCGTTTTGAGATACTTTCTCTGTCTGGATCATTTATGCCTAGTGAAAGCGGAGGAACAAAGAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGCCGTGTTCTGGGAGGAGGACTTGCTGGTCTATTAGTAGCTGCTGGCCCTGTTCAGGTTCTAGTGGGAAGTTTTCTGCCAGGTCACCAGCAGGAGCAAAAGCCAAAGAAGCAGAGAATCGAGCCTGTACAAGCTGCTATCCCAGCTACTGTGAATTCTATGCCTAGAGAAGAAACACTGGGGGCAAATGGTGGACCAAATCTGAATCTCACATCTCCCTCTTCCTTCCATGGAGACACCTGGGCTTCTCTGAACTCCATGCAGGGCTCAAGGAATCTGGATATTGAAAATAAATTACCGGTATCTGAAGGGGAAACTAAAGGACCCAGTCAATGA 972 49.59 MEGTEGINSGVTVKGEEAPDTYRVAARSENPSEFGGSTMTAVVAMPSSEMKKKRGRPRKYGPGGSLTMALSPMPISSSIPLTGEFSAWKRGRGRPVDSFKKQHKSESESAGERVAYSVGANFTPHVITVNAGEDVTMKIISFSQQGSRAICILSANGAISNVTLRQPNSSGGTLTYEGRFEILSLSGSFMPSESGGTKSRSGGMSVSLAGPDGRVLGGGLAGLLVAAGPVQVLVGSFLPGHQQEQKPKKQRIEPVQAAIPATVNSMPREETLGANGGPNLNLTSPSSFHGDTWASLNSMQGSRNLDIENKLPVSEGETKGPSQ* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14008043 14017362 - Vvi16g499 Vvi16g499 778148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g499 323 MobiDBLite consensus disorder prediction 44 65 - -
Vvi16g499 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 243 - -
Vvi16g499 323 Gene3D - 124 255 - -
Vvi16g499 323 ProSiteProfiles PPC domain profile profile. 119 258 IPR005175 -
Vvi16g499 323 MobiDBLite consensus disorder prediction 1 22 - -
Vvi16g499 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 316 IPR039605 GO:0003680
Vvi16g499 323 MobiDBLite consensus disorder prediction 276 307 - -
Vvi16g499 323 CDD DUF296 123 214 IPR005175 -
Vvi16g499 323 MobiDBLite consensus disorder prediction 261 323 - -
Vvi16g499 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 316 - -
Vvi16g499 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 237 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g468 Vvi16g499 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g499 - - vvi:100254941 570.466