Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g519 ATGGCGAAGCTATTCGCCTTCGGAGCGTTGTGGTTGTGCCTTGTGGTGACGGTGATTTGTCCAAGACACTGCGTTTCGGTGAGATCTGATCAAGAGATCAGGGACAGGTTTTATGGCAATCTTCTCAACGGTACGGCGCCGGATTCTGGTGACGGAAGCATAGCCAAGATGTTCGATCGCGTTCTCGAGAAAGAGTTCTCCGAGAAAGAGTTCTCCGAGAACGATCAGCCTGAAGGATCCAATGGAAGCAGCTTCAATAGCAGTGTAGCCGATCAACAAGCTGTACTGGAAACTGTGGCTAAAATTACTCATGAGAAAGCCAAGAGAAACGATACACAAGAAGCAAATGGTACAAGGTCTTTCCAGTTTCAAGATGTTTTTTCTCTGGATAATGAAGGTACTGATGATGTAACGACCTTGATAGATAAAAAGGATAATGTGTTTGTGATGTCAAACAAGAAATCCAAGTATCCAGTGCTACAAGTGGATCTAAGATTAATTTCCGATTTAGTGGTTGTAATAGTTTCTGCTGCCATTGGTGGAATTATCTTTTCCTGCCTGGGACAACCGGTTATTGTGGGCTATCTTCTTGCTGGTTCAATTATTGGACCAGGGGGCCTAAAATTCATCAGCGAAATGGTACAGGTTGAAACTGTTGCACAGTTTGGTGTTGTCTTTCTTCTTTTTGCTTTGGGGCTGGAATTTTCTTTGCCAAAGTTAAAAGCTGTGGGACCTGTTGCTGTTCTTGGAGGGCTGCTTCAAATTTTTATATTTATGTTCTTGTGCGGTGTAACTGCCATGTTATGTGGAGCAAAGTTGTCGGAGGGTGTATTTGTTGGTTCCTTCTTATCAATGTCATCAACAGCAGTGGTGGTAAAGTTCCTGGTAGAACGGAATACTAATAATGCTCTTCATGGTCAAGTTACTATTGGGACACTTATTTTACAGGATTGTGCTGTTGGTTTACTCTTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGCCTTTTGCAAGGAATGATATCAATGGGAAAGCTGCTTCTGGTTTTATCCATGTTTTTGACTGCTGCATCAGTGCTATCCTGGTCATTTGTTCCTCGGTTTTTAAAGCTGATGATACAACTATCATCTCAAACAAATGAACTCTATCAGCTTGCTTCAGTGGCTTTCTGCTTATTATCTGCTTGGTGCAGTGATAAGCTGGGCCTTAGTCTTGAATTGGGTTCATTTGTGGCTGGGGTTATGATATCTACGACTGACTTTGCGCAACATACTTTGGACCAGGTTGAACCGATCCGGAACCTATTTGCAGCTCTCTTCCTTTCAAGTATTGGAATGCTCATACACGTGCAGTTCCTATGGACCCATGTGGATATATTGCTAGCATCGGTTATTCTGGTTGTAGTTGTTAAAACAGCTGTTGTTGCAGTGGTCACTAAAGCCTTTGGATATAGCGTTAGGACATCTTTCCTTGTTGGAGTATTGCTTGCTCAAATAGGAGAATTTGCTTTTGTTCTCTTAAGCCGGGCTTCGAATCTTAAACTTATTGAGGGGAAGATGTATCTTCTTCTACTTGGGACAACAGCTCTTAGTCTGGTGACGACTCCTGTCCTGTTCAAACTGATCCCTGCGGTGATGCATTTGGGTGTTCTCATGCACTGGTTCCCTTCAGAGAACAGCAATCAGAATGAGGAGAGAGCTTCCGTGCTCGAATCACGTGATAGATTATTGTGA 1734 43.14 MAKLFAFGALWLCLVVTVICPRHCVSVRSDQEIRDRFYGNLLNGTAPDSGDGSIAKMFDRVLEKEFSEKEFSENDQPEGSNGSSFNSSVADQQAVLETVAKITHEKAKRNDTQEANGTRSFQFQDVFSLDNEGTDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLPKLKAVGPVAVLGGLLQIFIFMFLCGVTAMLCGAKLSEGVFVGSFLSMSSTAVVVKFLVERNTNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMISMGKLLLVLSMFLTAASVLSWSFVPRFLKLMIQLSSQTNELYQLASVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWTHVDILLASVILVVVVKTAVVAVVTKAFGYSVRTSFLVGVLLAQIGEFAFVLLSRASNLKLIEGKMYLLLLGTTALSLVTTPVLFKLIPAVMHLGVLMHWFPSENSNQNEERASVLESRDRLL* 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14444938 14477574 - Vvi16g519 Vvi16g519 778168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g519 577 Pfam Sodium/hydrogen exchanger family 171 540 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi16g519 577 Gene3D - 164 547 IPR038770 -
Vvi16g519 577 PANTHER K(+) EFFLUX ANTIPORTER 6 41 572 - -
Vvi16g519 577 MobiDBLite consensus disorder prediction 68 87 - -
Vvi16g519 577 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 41 572 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g519 - - vvi:100241309 1043.11