Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g528 ATGTCAAAGGATCAACGGCCTCCAGTAGCTGGTCCGGTGTTCAGTCAACTTATACACTTCAGTAAACTCTTTGATTATCAAGCATCTCTTGCCCAGAAGTACATTACTTACCGTATGATCCTGCCATCACATAGTGAAATTTACACTGCTGATCCAGTTAATGTTGAATATATACTCAAAACAAACTTCATCAATTATGGCAAGGGGGAGTATCATTGTGACATAATGAAAGATCTGTTTGGGGATGGAATTTTTGCAGTGGATGGAGAAAAATGGCGCCACCAGCGGAAGCTTGCAAGTTATGAATTCTCAACGAAAGTTTTGCGAGATTTCAGTACTTCTGTTTTTCAAGATAATGCTGCAAAATTGGTTTTGAAGGTTTCTATGGTGGCTGCAGCTAAGCAAATGATGGATTTGCAGGATATGTTGATGAAATCAACTTTGGACTCGATTTTTAAGGTGGGATTTGGGGTTGACCTGAATTCTCTATCTGGCTCAGATGTTTTCGGAAATCAATTCATCAAAGCCTTTGATGATTCTAATGTCATTGTGTATTGGAGATATGTTGATCTATTATGGAGGATTAAGAGGTTCCTTAATTTAGGCTTGGAAGCTGCTCTTAAGCATAACATCAAAGTCATTGACAGTTTTATTTTTGAATTAATTAGATGCAAGAGGGAGCAGATGAAGAATAAAGAGCTTGATAGAGGAAAAGAGGATATATTATCAAGGTTTCTGCTGGAGAGTAAGAAGGATCCAAAGAAAATGAATGATCGATATTTGAGAGATATAATTCTCAGTTTCGTCATTGCTGGTAAGGACACATCTGCTGACACGCTTACTTGGTTCTTTTACTTGCTCTGCAAGCATCCTCTGGTTCAAGAAAAGGTTGTGCTGGAGGTGAGAGAAGCAACTAAAGCTCAGATTAACATACCTGCTGATGAGTTTGCCAAGAAGATAACAGAAAAATCCCTCGACAAGATGCAGTATCTTCATGCAGCGTTAACTGAGACTCTCAGACTCTACCCAGCAGTTCCTATGGATGGAAAGCATTCAGAAGAAGATGATATTCTTCCTGATGGCTTCAAAGTAAAGAAAGGAGATGGTATGTGCTACATGGCTTATGCCATGGGGAGAATGAGATGCATTTGGGGTGAGGATGCGGGGGAGTTTCGACCTGAAAGATGGCTTGAGAATGGTGTTTTCCAACCTGAAAGTCCTTTTAAATTCACTGCTTTTCAGGCTGGTCCTCGGATTTGCTTGGGAAAGGAATTTGCTTATAGGCAACTGAAGATCTTGGCTGCTGTTCTTGTCTACTTTTTTAAATTCAAACTTGTGGATGAGAGGAAGGAGGCCAGGTATCGAACCATGTTCACCCTTCACATGGATCAAGGTCTCCATCTATATGCATTTCCTAGACTTCCCATGATTCACGCCAAGGACCACCACTTCCGGAGGAAGGCTAGAGGCCTAGGACCGTGA 1482 40.96 MSKDQRPPVAGPVFSQLIHFSKLFDYQASLAQKYITYRMILPSHSEIYTADPVNVEYILKTNFINYGKGEYHCDIMKDLFGDGIFAVDGEKWRHQRKLASYEFSTKVLRDFSTSVFQDNAAKLVLKVSMVAAAKQMMDLQDMLMKSTLDSIFKVGFGVDLNSLSGSDVFGNQFIKAFDDSNVIVYWRYVDLLWRIKRFLNLGLEAALKHNIKVIDSFIFELIRCKREQMKNKELDRGKEDILSRFLLESKKDPKKMNDRYLRDIILSFVIAGKDTSADTLTWFFYLLCKHPLVQEKVVLEVREATKAQINIPADEFAKKITEKSLDKMQYLHAALTETLRLYPAVPMDGKHSEEDDILPDGFKVKKGDGMCYMAYAMGRMRCIWGEDAGEFRPERWLENGVFQPESPFKFTAFQAGPRICLGKEFAYRQLKILAAVLVYFFKFKLVDERKEARYRTMFTLHMDQGLHLYAFPRLPMIHAKDHHFRRKARGLGP* 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14576734 14592040 + Vvi16g528 Vvi16g528 778177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g528 493 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PANTHER CYTOCHROME P450 2 473 - -
Vvi16g528 493 Pfam Cytochrome P450 7 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 PANTHER CYTOCHROME P450 2 473 - -
Vvi16g528 493 Gene3D Cytochrome P450 7 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g528 493 SUPERFAMILY Cytochrome P450 8 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g528 - - vvi:100247993 958.362