Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g533 ATGTGTTTTTGTCAAAATTCTACAGCACCACACCCTCTCCCTCTTCTTTCTTATTTCAAGCTCCTCGCCTCCATTTTCAGACTCCCCATTTTTCTCTTCACCCTCTCACTCTCTTCTTCTCCCAAAACAATGCCTAGAGTTTCAGTAAAATGGCTCTTTCTGTTCCTAATCACAAGCTCTCTGAGCTTCTCCGCTGTTCTTTCTACAGTCTCAAAGAAGGCTTACATAGTTCAAATGGATAAATCGGAGATGCCTGAGTCCTTCTCCAATCATCTTGAGTGGTACTCCTCTACGATCAAATCAGTGGCGTCCCAACTCCAGGAAGAGGCCAATGGAGAAGATGAAGAGAGGATAATTTACAGCTATGAAACTGCATTTCATGGAGTGGCTGCTCTGCTCAGTGAAGAGGAAGCTGAGAGACTAGAAGAAGAGCATGGTGTGGTGGCTGTTTTTCCTGAAACAGTGTACCAACTGCACACCACAAGGAGTCCCGTGTTCCTTGGCCTCGAACCCGCCGACAGTACCAGCGTCTGGTCTGAGAAACTCTCGGACAACGACGTCATAGTTGGAGTTCTCGACACCGGGATATGGCCCGAGAGCGAGAGCTTCAACGATACTGGCTTTACCTCAGTTCCAGCTCATTGGAAAGGCGCGTGCGAGACAGGACGAGCCTTTACCAGGAACCACTGTAACAAGAAGATTGTCGGTGCCCGGGTCTTTTACCGGGGATATGAATCCGCCTCAGGGAAAATTAACGAGAAAGATGAATATAAATCGCCAAGAGATCAAGATGGGCATGGGACTCACACTGCAGCCACCGTTGCAGGCTCTCCTGTTCGCCACGCAAATCTTCTGGGCTATGCGGCTGGGACAGCTCGAGGAATGGCACCGGGAGCTAGAATTGCAGCCTACAAAGTGTGCTGGGTTGGCGGCTGCTTCAGCTCCGATATTCTATCTGCAGTCGATCGCGCTGTGGCCGATGGAGTTAACGTTTTATCGATCTCTTTGGGCGGTGGGGTTTCATCTTACTACCGCGACAGCTTAGCGATAGCAACTTTTGGGGCAATGGAGATGGGTGTTTTTGTGTCGTGCTCCGCCGGCAATGGCGGGCCTGATCCGATAAGTCTTACCAATGTATCGCCATGGATCACCACAGTTGGGGCTAGCACCATGGATAGGGATTTTCCAGCTGTTGTCAACCTGGGGACTGGGAAAAGTATAACTGGACTAGTTGCGGATTCTCACCTTCTTCCAGCAGTTGCTGTCGGCGAAACTACTGGGAAATTGATCAAACTGAGGTTCAACATACTGTCCGGAACTTCCATGTCATGCCCCCATGTAAGTGGTATTGCCGCATTGCTCAAGGCTAGGCACCCGGATTGGAGTCCAGCAGCGATAAGATCAGCATTGATGACAACAGCCTATGTTCATGACAACACTCGCAACCCTTTGAGAGATGCCTCAACCGGCCAGCCTTCAACCCCGTACGACCATGGTGCTGGGCACATAAACCCACTGAAAGCCCTTGATCCTGGTTTGATATATGATATCGGACCACAGGACTACTTCGAATTCCTCTGGGACTTGAATTACCCAGCCATCTCAGCCGTCTTCCCAGACAAGGCGTCAGTTACCACATTGACCCTTCACAGAACTGTCACCAACGTTGGGCCTCCCATGTCCAAATACCATGTTGCAGTTTCACAATTCAAAGGGGTTGCTGTGAAAATCGAGCCAGCCGTGCTGAATTTCACCAGCAAACACCAGAAACTGTCGTACAAGATTACCTTGACCACAAAGTCTAGGCAGTCTTCGCCAGAATTTGGAAGTTTGATATGGAAAGATGGAGTACACAAGGTGAGAAGCCCAGTTGCAATCACATGGCTGCCTCCACTATAG 1899 49.71 MCFCQNSTAPHPLPLLSYFKLLASIFRLPIFLFTLSLSSSPKTMPRVSVKWLFLFLITSSLSFSAVLSTVSKKAYIVQMDKSEMPESFSNHLEWYSSTIKSVASQLQEEANGEDEERIIYSYETAFHGVAALLSEEEAERLEEEHGVVAVFPETVYQLHTTRSPVFLGLEPADSTSVWSEKLSDNDVIVGVLDTGIWPESESFNDTGFTSVPAHWKGACETGRAFTRNHCNKKIVGARVFYRGYESASGKINEKDEYKSPRDQDGHGTHTAATVAGSPVRHANLLGYAAGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLAIATFGAMEMGVFVSCSAGNGGPDPISLTNVSPWITTVGASTMDRDFPAVVNLGTGKSITGLVADSHLLPAVAVGETTGKLIKLRFNILSGTSMSCPHVSGIAALLKARHPDWSPAAIRSALMTTAYVHDNTRNPLRDASTGQPSTPYDHGAGHINPLKALDPGLIYDIGPQDYFEFLWDLNYPAISAVFPDKASVTTLTLHRTVTNVGPPMSKYHVAVSQFKGVAVKIEPAVLNFTSKHQKLSYKITLTTKSRQSSPEFGSLIWKDGVHKVRSPVAITWLPPL* 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 14692377 14695065 + Vvi16g533 Vvi16g533 778182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g533 632 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 65 409 - -
Vvi16g533 632 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 431 526 - -
Vvi16g533 632 MobiDBLite consensus disorder prediction 481 501 - -
Vvi16g533 632 Pfam Peptidase inhibitor I9 75 159 IPR010259 -
Vvi16g533 632 ProSiteProfiles Serine proteases, subtilase domain profile. 155 509 - -
Vvi16g533 632 Gene3D Peptidase S8/S53 domain 160 525 IPR036852 GO:0004252|GO:0006508
Vvi16g533 632 CDD Peptidases_S8_3 156 475 IPR034197 -
Vvi16g533 632 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 59 159 IPR037045 -
Vvi16g533 632 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 65 409 IPR045051 -
Vvi16g533 632 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 431 526 IPR045051 -
Vvi16g533 632 MobiDBLite consensus disorder prediction 481 495 - -
Vvi16g533 632 Pfam Fibronectin type-III domain 528 626 IPR041469 -
Vvi16g533 632 ProSitePatterns Serine proteases, subtilase family, serine active site. 439 449 IPR023828 -
Vvi16g533 632 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 528 628 IPR045051 -
Vvi16g533 632 Gene3D - 526 629 - -
Vvi16g533 632 SUPERFAMILY Subtilisin-like 158 513 IPR036852 GO:0004252|GO:0006508
Vvi16g533 632 Pfam Subtilase family 185 480 IPR000209 GO:0006508|GO:0008236
Vvi16g533 632 PRINTS Subtilisin serine protease family (S8) signature 262 275 IPR015500 -
Vvi16g533 632 PRINTS Subtilisin serine protease family (S8) signature 184 203 IPR015500 -
Vvi16g533 632 PRINTS Subtilisin serine protease family (S8) signature 438 454 IPR015500 -
Vvi16g533 632 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 528 628 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g491 Vvi16g533 ECH
Vvi15g496 Vvi16g533 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g533 - - vvi:100253196 716.457