Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g551 ATGACCCTTGCACTTGAAGTTAAATACTTCCATTTTTTTACCTGCAGTACTGCATCTGCAAAAGAGTTGCTAATTTACAGTTATGGAAGAAGTTTTAATGGGTTTGCAGCCAAACTATCAGATGAAGAATTGGGGTTACAGATATGGAAGAAGTGGTTTCAGTTCTGCCAAACAGCATGCATGCTAAAGCTTCACACAACAAGATCATGGGACTTCATGGGATTCAATCAATCCCATGTCAGAGATTCCCAAGGAGGGGATGTGATTGTTGGGCTACTAGATACAGGAATCTGGCCAGAATCGGAGAGCTTCAGCGATGAAGGCTTTGGCCCCCCACCAGCAAAATGGAAAGGAACGTGCCAAACTGAGAATAACTTCACCTGCAACAACAAGATAATTGGAGCTCGATACTACAACAGCGAAAATCAGTATTATGATGGAGACATCAAATCTCCAAGGGATTCAGAGGGACATGGGACTCACACTGCTTCAACCGCTGCAGGTCGAGAGGTGGCAGGAGCAAGCTACTATGGCCTAGCTGAAGGACTTGCCAGGGGTGGACACCCCAAAGCAAGGATTGCTGTGTACAAAGTTTGTTGGGTGATAGGATGTGCTGTTGCAGATATACTTGCTGCCTTTGATGATGCAATTGCAGATGGGGTTGATATCATTTCAGTTTCCCTTGGAAGCTCCTTAACCCTCCAATATTTTGAAGACCCAATAGCAATTGGATCTTTTCATGCAATGAAAAGTGGGATATTAACCTCAAATTCTGCTGGAAACGATGGGCCACTGGGGGGTATCAGTAATTACTCGCCTTGGTCACTAACTGTAGCTGCCAGCAGCATTGACAGGAAATTTGTTTCTCAATTGGTACTTGGCAATGGACAGACATTCAAGGGAGTTAACATCAATAACTTTGAGCTCAATGGAACATATCCTTTAATTTGGGGAGGGGATGCAGCAAACGTTTCTGGCCATCAGATCCCTTTAAGCTCGGAAAGCTGCTTTCCTGGGGATCTTGATTCAAGCAAAGTCAAGGGAAAGATCGTTCTCTGTGAAAGCCTTTGGGATGGTTCTGGTGTTGTCATGGCAGGAGGAGTGGGAATTATAATGCCTGCATGGTATTTCAATGACTTTGCCTTCTCTTTCCCCTTGCCAACAACAATCCTCCGCAGACAAGACATAGACAAAGTATTGGAGTACACCAGATCTTCCAAGCATCCTATAGCGACAATTCTGCCTGGTGAGACTCAGAAGGATGTCATGGCTCCTACCGTGGTCTCCTTTTCATCCAGAGGTCTTAACCCCATCACTCTTGACATTCTTAAGCCTGATGTTACCGCACCTGGTGTTGATATTCTTGCGGCCTGGTCTCCCATTGCACCACCTTCAGTTTACCAGCATGATACCAGGAGCACCCACTACAACATAATCTCTGGCACTTCCATGTCTTGCCCACATGCTAGTGGAGCTGCAGCTTATGTTAAGGCTACTAACCCAAGCTGGTCTCCTTCTGCCATCAAATCTGCCCTCATGACCACAGCTTATGCGATGGACCCAAGGAAGAACGATGACAAAGAATTTGCTTATGGCTCCAGTCATATCAACCCAGTGAAGGCAGCCGATCCTGGCTTAGTCCATGAGACATCTGAGGAAGAGTACATCAACTTCCTCTGCAAGCAGGGTTACAATACCAGCACCTTAAGACTCATCACTGGTGACAGCAGTGCCTGCAATAGCACCGAACTGGGCAGAGCTTGGGATCTAAACTATCCGTCATTCTCATTGACCATTGAAGATGGCCACAGAATCATGGGCATTTTCACAAGGACGGTCACAAATGTAGGATTCCCGAACTCAACTCAACCTACCAAGCTAGCATCTACATGCCGAATTCTCTCGAGGTTAAGGTGGAGCCCCCTGTTCTTTCATTCTCAGCCACTGGAGAGAAGAAATCCTTTTCAGTGA 1971 46.07 MTLALEVKYFHFFTCSTASAKELLIYSYGRSFNGFAAKLSDEELGLQIWKKWFQFCQTACMLKLHTTRSWDFMGFNQSHVRDSQGGDVIVGLLDTGIWPESESFSDEGFGPPPAKWKGTCQTENNFTCNNKIIGARYYNSENQYYDGDIKSPRDSEGHGTHTASTAAGREVAGASYYGLAEGLARGGHPKARIAVYKVCWVIGCAVADILAAFDDAIADGVDIISVSLGSSLTLQYFEDPIAIGSFHAMKSGILTSNSAGNDGPLGGISNYSPWSLTVAASSIDRKFVSQLVLGNGQTFKGVNINNFELNGTYPLIWGGDAANVSGHQIPLSSESCFPGDLDSSKVKGKIVLCESLWDGSGVVMAGGVGIIMPAWYFNDFAFSFPLPTTILRRQDIDKVLEYTRSSKHPIATILPGETQKDVMAPTVVSFSSRGLNPITLDILKPDVTAPGVDILAAWSPIAPPSVYQHDTRSTHYNIISGTSMSCPHASGAAAYVKATNPSWSPSAIKSALMTTAYAMDPRKNDDKEFAYGSSHINPVKAADPGLVHETSEEEYINFLCKQGYNTSTLRLITGDSSACNSTELGRAWDLNYPSFSLTIEDGHRIMGIFTRTVTNVGFPNSTQPTKLASTCRILSRLRWSPLFFHSQPLERRNPFQ* 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 15057515 15063943 - Vvi16g551 Vvi16g551 778200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g551 656 CDD PA_subtilisin_like 291 413 - -
Vvi16g551 656 CDD Peptidases_S8_3 62 517 IPR034197 -
Vvi16g551 656 PRINTS Subtilisin serine protease family (S8) signature 85 104 IPR015500 -
Vvi16g551 656 PRINTS Subtilisin serine protease family (S8) signature 154 167 IPR015500 -
Vvi16g551 656 PRINTS Subtilisin serine protease family (S8) signature 480 496 IPR015500 -
Vvi16g551 656 ProSiteProfiles Serine proteases, subtilase domain profile. 69 542 - -
Vvi16g551 656 ProSitePatterns Serine proteases, subtilase family, serine active site. 481 491 IPR023828 -
Vvi16g551 656 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 51 IPR037045 -
Vvi16g551 656 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 629 IPR045051 -
Vvi16g551 656 Gene3D Peptidase S8/S53 domain 87 555 IPR036852 GO:0004252|GO:0006508
Vvi16g551 656 SUPERFAMILY Subtilisin-like 64 546 IPR036852 GO:0004252|GO:0006508
Vvi16g551 656 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.1 31 629 - -
Vvi16g551 656 Gene3D - 284 420 - -
Vvi16g551 656 Pfam Subtilase family 86 523 IPR000209 GO:0006508|GO:0008236
Vvi16g551 656 Gene3D - 559 636 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g551 - - vvi:100853805 1003.43