Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g553 | ATGAGTGCATGGCTCACAGCTAACAAACTAATGGGGTTTCTCAGCAAGCTTAGTTTAACATGCAGGTCCATATCGTTTATATGGGAGAGAAGCCTCATGGAGCTGTTTCAATGTACTGCATCTGCAAAAGAGTCGCTAATTTACAGCTATGGAAGAAGTTTTAATGGGTTTGCAGCTAAACTTTCAGATGAAGAGGTTACAAGATTTGCAGATATGGACGGAGTGGTTTCAGTTCTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATGTTAGAGATTCCCAAGGAGGAGATGTGATTATTGGGCTGCTAGATACAGGAATTTACAATGTGAATAAAAGTCTGACGGAATTGTCGAAATACCACAGCAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACAGCTGCGGGCCGAGAGGTGGCAAGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTCACCTTCCCTGAACCTTATTTTGAAGACGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGGTGTTATCATGGCAGGAGGAGTGGGAATCATAATGCCCGCCTGGTATTTCAATGACTTTGCCTTCACTTTTCCCTTGCCAGCAACACTCCTCCGCAGACAAGATATGGACAAAGTATTGCAGTATGCTAGATTTTCCAAGAACCCAATGGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGCCCCAATCCCATTTCTCCTGATATTCTCAAGATGAAGAGGTTTACAAGATTTGCAGATATGGACGGAGTGGTTTCAGTTGTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATTTCATTACCTCGTTAAGTGCAAAATTAAGGAATTTCGGTTACTTCATAGGAATTTGGCCAGAATCCGAGAGCTTCAGCGATGAAGGATTTGGCCCTCCACCTGCAAAATGGAAAGGAATGTGCCAAACTGAGAATAACTTCACCTGCAACAACAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACCGCTGCGGGCCGAGAGGTGGCAGGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTAACCTTCCCTGAACCTTATTTTGAAGACGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGGTGTTATCATGGCAGGAGGAGTGGGAATCATAATGCCCGCCTGGTATTTCAATGACTTTGCCTTCACTTTTCCCTTGCCAGCAACACTCCTCCGAAGACAAGATATGGACAAAGTATTGCAGTATGCTAGATTTTCCAAGAATCCAATAGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGTCCCAATCCCATTTCTCCTGATATTCTCAAGCCTGATCTGACTGCACCTGGTGTTGATATCCTCGCGGCCTGGTCACCCATTGTATCTCCATCAGAATACGAGCGTGATACCAGGACCGCCCAATACAACATAATCTCCGGCACATCCATGTCTTGTCCACATGCCAGTGGAGCAGCAGCTTATGTGAAGTCCATCCACCCAAGCTGGTCTCCTGCTGCCATTAAATCTGCACTCATGACCACAGCTTATGTGATGGACACAAGGAAGAACGAGGACAAAGAGTTTGCTTACGGTTCTGGCCATATCAACCCGGTGAAGGCGGTGGATCCTGGCCTAATCTACAACACATCTAAGCCAGATTACATCAACTTCCTATGCAAGCAGGGTTACAACACCAGCACATTAAGACTCATCACGGAAGATGGGCTAGATATCATGGGCATTTTCAGTAGGACAGTTACAAATGTAGGATCGCCAAACTCAACCTACCATGCTAGCGTCTACATGCCCAATTCTATTGAGATTGAGGTGGAGCCTCCTGTTCTTTCATTCTCAGCAATTGGAGAGAAGAAATCCTTTACAGTGAGGGTGTATGGACCACAGATAAATATGCAACCAATCATATCAGGTGCTATCCTCTGGAAAGATGGTGTCCATGTGGTGAGGGCTCCGCTCGCGGTTTACACAGTCCTCCCATCAGTAACTTCCTCATATGGAAATCCCTCCAAGCAAACAAAGAGATCAAACCTGAAAGCTTCTAGCCCCATGAAGAAATCAGACCTGAAAGGCTCCTATATATTACAAAAATGGGATTTTTTAGGTGGAACTGCCAAACTGATCACCTCCACGATCCATCAAAAATAA | 3396 | 45.49 | MSAWLTANKLMGFLSKLSLTCRSISFIWERSLMELFQCTASAKESLIYSYGRSFNGFAAKLSDEEVTRFADMDGVVSVLPNSMLELHTTRSWDFMGFTQSHVRDSQGGDVIIGLLDTGIYNVNKSLTELSKYHSKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVASASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGFTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSGVIMAGGVGIIMPAWYFNDFAFTFPLPATLLRRQDMDKVLQYARFSKNPMATILVGETRKDVMAPIVASFSSRGPNPISPDILKMKRFTRFADMDGVVSVVPNSMLELHTTRSWDFMGFTQSHFITSLSAKLRNFGYFIGIWPESESFSDEGFGPPPAKWKGMCQTENNFTCNNKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVAGASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGLTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSGVIMAGGVGIIMPAWYFNDFAFTFPLPATLLRRQDMDKVLQYARFSKNPIATILVGETRKDVMAPIVASFSSRGPNPISPDILKPDLTAPGVDILAAWSPIVSPSEYERDTRTAQYNIISGTSMSCPHASGAAAYVKSIHPSWSPAAIKSALMTTAYVMDTRKNEDKEFAYGSGHINPVKAVDPGLIYNTSKPDYINFLCKQGYNTSTLRLITEDGLDIMGIFSRTVTNVGSPNSTYHASVYMPNSIEIEVEPPVLSFSAIGEKKSFTVRVYGPQINMQPIISGAILWKDGVHVVRAPLAVYTVLPSVTSSYGNPSKQTKRSNLKASSPMKKSDLKGSYILQKWDFLGGTAKLITSTIHQK* | 1132 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 15161778 | 15166558 | - | Vvi16g553 | Vvi16g553 | 778202 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g553 | 1131 | CDD | PA_subtilisin_like | 701 | 823 | - | - | |
Vvi16g553 | 1131 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.1 | 456 | 985 | - | - | |
Vvi16g553 | 1131 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.1 | 45 | 449 | - | - | |
Vvi16g553 | 1131 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.1 | 983 | 1081 | - | - | |
Vvi16g553 | 1131 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 891 | 901 | IPR023828 | - | |
Vvi16g553 | 1131 | MobiDBLite | consensus disorder prediction | 1081 | 1101 | - | - | |
Vvi16g553 | 1131 | SUPERFAMILY | Subtilisin-like | 508 | 956 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi16g553 | 1131 | MobiDBLite | consensus disorder prediction | 1081 | 1099 | - | - | |
Vvi16g553 | 1131 | Pfam | Subtilase family | 549 | 942 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi16g553 | 1131 | Pfam | Subtilase family | 108 | 448 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi16g553 | 1131 | Gene3D | - | 977 | 1077 | - | - | |
Vvi16g553 | 1131 | Pfam | Peptidase inhibitor I9 | 40 | 87 | IPR010259 | - | |
Vvi16g553 | 1131 | SUPERFAMILY | Subtilisin-like | 86 | 442 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi16g553 | 1131 | Pfam | Fibronectin type-III domain | 989 | 1071 | IPR041469 | - | |
Vvi16g553 | 1131 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 86 | IPR037045 | - | |
Vvi16g553 | 1131 | CDD | Peptidases_S8_3 | 471 | 927 | IPR034197 | - | |
Vvi16g553 | 1131 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 456 | 985 | IPR045051 | - | |
Vvi16g553 | 1131 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 45 | 449 | IPR045051 | - | |
Vvi16g553 | 1131 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 983 | 1081 | IPR045051 | - | |
Vvi16g553 | 1131 | Gene3D | - | 694 | 830 | - | - | |
Vvi16g553 | 1131 | Gene3D | - | 291 | 423 | - | - | |
Vvi16g553 | 1131 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 91 | 368 | - | - | |
Vvi16g553 | 1131 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 478 | 952 | - | - | |
Vvi16g553 | 1131 | Gene3D | Peptidase S8/S53 domain | 87 | 480 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi16g553 | 1131 | CDD | PA_subtilisin_like | 296 | 418 | - | - | |
Vvi16g553 | 1131 | Gene3D | Peptidase S8/S53 domain | 505 | 965 | IPR036852 | GO:0004252|GO:0006508 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g553 | - | - | vvi:100243906 | 1309.28 |