Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g553 ATGAGTGCATGGCTCACAGCTAACAAACTAATGGGGTTTCTCAGCAAGCTTAGTTTAACATGCAGGTCCATATCGTTTATATGGGAGAGAAGCCTCATGGAGCTGTTTCAATGTACTGCATCTGCAAAAGAGTCGCTAATTTACAGCTATGGAAGAAGTTTTAATGGGTTTGCAGCTAAACTTTCAGATGAAGAGGTTACAAGATTTGCAGATATGGACGGAGTGGTTTCAGTTCTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATGTTAGAGATTCCCAAGGAGGAGATGTGATTATTGGGCTGCTAGATACAGGAATTTACAATGTGAATAAAAGTCTGACGGAATTGTCGAAATACCACAGCAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACAGCTGCGGGCCGAGAGGTGGCAAGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTCACCTTCCCTGAACCTTATTTTGAAGACGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGGTGTTATCATGGCAGGAGGAGTGGGAATCATAATGCCCGCCTGGTATTTCAATGACTTTGCCTTCACTTTTCCCTTGCCAGCAACACTCCTCCGCAGACAAGATATGGACAAAGTATTGCAGTATGCTAGATTTTCCAAGAACCCAATGGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGCCCCAATCCCATTTCTCCTGATATTCTCAAGATGAAGAGGTTTACAAGATTTGCAGATATGGACGGAGTGGTTTCAGTTGTTCCAAACAGCATGCTAGAGCTTCACACAACAAGATCATGGGACTTCATGGGATTTACTCAATCCCATTTCATTACCTCGTTAAGTGCAAAATTAAGGAATTTCGGTTACTTCATAGGAATTTGGCCAGAATCCGAGAGCTTCAGCGATGAAGGATTTGGCCCTCCACCTGCAAAATGGAAAGGAATGTGCCAAACTGAGAATAACTTCACCTGCAACAACAAGATCATTGGAGCTCGCTACTACAATAGCTATAATGAGTATTATGATGGAGACATCAAATCTCCAAGGGACTCAGAGGGACATGGGACTCACACAGCTTCAACCGCTGCGGGCCGAGAGGTGGCAGGCGCAAGCTTCTACGGCTTAGCTCAAGGACTTGCCAGAGGTGGATACCCCAATGCAAGAATTGCTGTGTACAAGGTTTGTTGGGTAAGAGGATGTGCTGCTGCAGATATACTCGCTGCGTTTGATGATGCCATCGCAGATGGGGTCGATATCATATCAGTTTCCCTTGGATTAACCTTCCCTGAACCTTATTTTGAAGACGTCATAGCAATTGGATCTTTCCATGCAATGGGACAAGGGATATTAACCTCAACTTCTGCAGGAAACGATGGTCCATGGTTGGGTTGGGTCAGTAATTACTCGCCTTGGTCGCTGACTGTAGCTGCCAGCAGCATTGATAGGAAATTTGTTTCCAAATTGGTTCTTGGCAATGGACAGATCTTCTCGGGAATTGTCATCAATAACTTGGAGCTCAATGGAACATATCCTTTAATCTGGGGAGGAGATGCAGCAAATGTTTCTGCCCAAGAAACCCCTTTAAGTTCAGCAGACTGCCTTCCTGGGGACCTAGATTCACGCAAAGTCAAGGGAAAGATTGTTCTCTGCGAGTTCCTTTGGGATGGATCTGGTGTTATCATGGCAGGAGGAGTGGGAATCATAATGCCCGCCTGGTATTTCAATGACTTTGCCTTCACTTTTCCCTTGCCAGCAACACTCCTCCGAAGACAAGATATGGACAAAGTATTGCAGTATGCTAGATTTTCCAAGAATCCAATAGCAACAATTTTGGTTGGTGAGACTAGGAAGGATGTAATGGCTCCCATTGTTGCCTCCTTTTCATCCAGAGGTCCCAATCCCATTTCTCCTGATATTCTCAAGCCTGATCTGACTGCACCTGGTGTTGATATCCTCGCGGCCTGGTCACCCATTGTATCTCCATCAGAATACGAGCGTGATACCAGGACCGCCCAATACAACATAATCTCCGGCACATCCATGTCTTGTCCACATGCCAGTGGAGCAGCAGCTTATGTGAAGTCCATCCACCCAAGCTGGTCTCCTGCTGCCATTAAATCTGCACTCATGACCACAGCTTATGTGATGGACACAAGGAAGAACGAGGACAAAGAGTTTGCTTACGGTTCTGGCCATATCAACCCGGTGAAGGCGGTGGATCCTGGCCTAATCTACAACACATCTAAGCCAGATTACATCAACTTCCTATGCAAGCAGGGTTACAACACCAGCACATTAAGACTCATCACGGAAGATGGGCTAGATATCATGGGCATTTTCAGTAGGACAGTTACAAATGTAGGATCGCCAAACTCAACCTACCATGCTAGCGTCTACATGCCCAATTCTATTGAGATTGAGGTGGAGCCTCCTGTTCTTTCATTCTCAGCAATTGGAGAGAAGAAATCCTTTACAGTGAGGGTGTATGGACCACAGATAAATATGCAACCAATCATATCAGGTGCTATCCTCTGGAAAGATGGTGTCCATGTGGTGAGGGCTCCGCTCGCGGTTTACACAGTCCTCCCATCAGTAACTTCCTCATATGGAAATCCCTCCAAGCAAACAAAGAGATCAAACCTGAAAGCTTCTAGCCCCATGAAGAAATCAGACCTGAAAGGCTCCTATATATTACAAAAATGGGATTTTTTAGGTGGAACTGCCAAACTGATCACCTCCACGATCCATCAAAAATAA 3396 45.49 MSAWLTANKLMGFLSKLSLTCRSISFIWERSLMELFQCTASAKESLIYSYGRSFNGFAAKLSDEEVTRFADMDGVVSVLPNSMLELHTTRSWDFMGFTQSHVRDSQGGDVIIGLLDTGIYNVNKSLTELSKYHSKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVASASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGFTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSGVIMAGGVGIIMPAWYFNDFAFTFPLPATLLRRQDMDKVLQYARFSKNPMATILVGETRKDVMAPIVASFSSRGPNPISPDILKMKRFTRFADMDGVVSVVPNSMLELHTTRSWDFMGFTQSHFITSLSAKLRNFGYFIGIWPESESFSDEGFGPPPAKWKGMCQTENNFTCNNKIIGARYYNSYNEYYDGDIKSPRDSEGHGTHTASTAAGREVAGASFYGLAQGLARGGYPNARIAVYKVCWVRGCAAADILAAFDDAIADGVDIISVSLGLTFPEPYFEDVIAIGSFHAMGQGILTSTSAGNDGPWLGWVSNYSPWSLTVAASSIDRKFVSKLVLGNGQIFSGIVINNLELNGTYPLIWGGDAANVSAQETPLSSADCLPGDLDSRKVKGKIVLCEFLWDGSGVIMAGGVGIIMPAWYFNDFAFTFPLPATLLRRQDMDKVLQYARFSKNPIATILVGETRKDVMAPIVASFSSRGPNPISPDILKPDLTAPGVDILAAWSPIVSPSEYERDTRTAQYNIISGTSMSCPHASGAAAYVKSIHPSWSPAAIKSALMTTAYVMDTRKNEDKEFAYGSGHINPVKAVDPGLIYNTSKPDYINFLCKQGYNTSTLRLITEDGLDIMGIFSRTVTNVGSPNSTYHASVYMPNSIEIEVEPPVLSFSAIGEKKSFTVRVYGPQINMQPIISGAILWKDGVHVVRAPLAVYTVLPSVTSSYGNPSKQTKRSNLKASSPMKKSDLKGSYILQKWDFLGGTAKLITSTIHQK* 1132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 15161778 15166558 - Vvi16g553 Vvi16g553 778202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g553 1131 CDD PA_subtilisin_like 701 823 - -
Vvi16g553 1131 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.1 456 985 - -
Vvi16g553 1131 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.1 45 449 - -
Vvi16g553 1131 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.1 983 1081 - -
Vvi16g553 1131 ProSitePatterns Serine proteases, subtilase family, serine active site. 891 901 IPR023828 -
Vvi16g553 1131 MobiDBLite consensus disorder prediction 1081 1101 - -
Vvi16g553 1131 SUPERFAMILY Subtilisin-like 508 956 IPR036852 GO:0004252|GO:0006508
Vvi16g553 1131 MobiDBLite consensus disorder prediction 1081 1099 - -
Vvi16g553 1131 Pfam Subtilase family 549 942 IPR000209 GO:0006508|GO:0008236
Vvi16g553 1131 Pfam Subtilase family 108 448 IPR000209 GO:0006508|GO:0008236
Vvi16g553 1131 Gene3D - 977 1077 - -
Vvi16g553 1131 Pfam Peptidase inhibitor I9 40 87 IPR010259 -
Vvi16g553 1131 SUPERFAMILY Subtilisin-like 86 442 IPR036852 GO:0004252|GO:0006508
Vvi16g553 1131 Pfam Fibronectin type-III domain 989 1071 IPR041469 -
Vvi16g553 1131 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 86 IPR037045 -
Vvi16g553 1131 CDD Peptidases_S8_3 471 927 IPR034197 -
Vvi16g553 1131 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 456 985 IPR045051 -
Vvi16g553 1131 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 449 IPR045051 -
Vvi16g553 1131 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 983 1081 IPR045051 -
Vvi16g553 1131 Gene3D - 694 830 - -
Vvi16g553 1131 Gene3D - 291 423 - -
Vvi16g553 1131 ProSiteProfiles Serine proteases, subtilase domain profile. 91 368 - -
Vvi16g553 1131 ProSiteProfiles Serine proteases, subtilase domain profile. 478 952 - -
Vvi16g553 1131 Gene3D Peptidase S8/S53 domain 87 480 IPR036852 GO:0004252|GO:0006508
Vvi16g553 1131 CDD PA_subtilisin_like 296 418 - -
Vvi16g553 1131 Gene3D Peptidase S8/S53 domain 505 965 IPR036852 GO:0004252|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g553 - - vvi:100243906 1309.28