Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g566 ATGGCTCTTCTCCTTCCAAAAACCAACTTTGTCTTAGCCATTTTCCTTCTGTTGCTAATGCTTTCCACATCCAAAGGATCGCTGGACGTGCATTACTACCATCAAACATGTCCACAAGCTGAGAATATCATCTTTGAAACTGTTCGCAAAGCTTCGATCAATGACCCTAAAGTTCCAGCTCGAATCCTTCGAATGTTCTTCCATGACTGCTTTATAAGGGGGTGTGATGCATCGGTGTTGCTGGACTCAACTCCTGGAAACCAAGCGGAGAAAGATGGTCCTCCTAATATTTCACTTGCATCATTCTATGTGATCGAAGACGCGAAAACTAAGCTGGAAATGGCATGTCCGGGGACAGTTTCTTGTGCTGATATCATTGCCATTGCAGCAAGAGATGTTGTAGCCATGTCCAGAGGCCCGTATTGGAATGTACTCACAGGAAGGAAAGATGGGAGGGTGTCCAAAGCTTCTGAAACCGTTAACCTACCAGCTCCAACCTTCAATGTAACTCAACTCATTCAGAGCTTTGCTCAAAGGGGCTTAGGACTTAAGGATTTGGTTGCTCTATCTGGTGGACACAGTCTTGGCTTCTCACATTGTTCTTCTTTTGAAGCTCGGGTTCACAACTTTAGCTCGGTACATGACATTGATCCTACCATGAACACCGAGTTTGCAGAAAGGCTGAAGAAGAAATGCCCCAAGCCGAATAGCGATCGCAATGCTGGAGAGTTTTTGGACTCGACTGCTTCCACTTTTGACAATAACTATTACCTACAACTAATGGCAGGGGAGGGCTTGTTTGGATCGGATCAGGCACTGCTTACAGATTACAGGACTAGATGGATTGTTGAATCATTTGCTAAAGATCAAGGTTTGTTCTTCAGAGAATTCACGGCTTCGATGGTGAAACTTGGAAATGTAGGAGTCCTTGAAAATGGAGAAGTGAGACTCAAATGCCAAGCAGTGAACTGA 972 44.65 MALLLPKTNFVLAIFLLLLMLSTSKGSLDVHYYHQTCPQAENIIFETVRKASINDPKVPARILRMFFHDCFIRGCDASVLLDSTPGNQAEKDGPPNISLASFYVIEDAKTKLEMACPGTVSCADIIAIAARDVVAMSRGPYWNVLTGRKDGRVSKASETVNLPAPTFNVTQLIQSFAQRGLGLKDLVALSGGHSLGFSHCSSFEARVHNFSSVHDIDPTMNTEFAERLKKKCPKPNSDRNAGEFLDSTASTFDNNYYLQLMAGEGLFGSDQALLTDYRTRWIVESFAKDQGLFFREFTASMVKLGNVGVLENGEVRLKCQAVN* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 15385323 15386478 - Vvi16g566 Vvi16g566 778215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g566 323 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Vvi16g566 323 Pfam Peroxidase 47 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 SUPERFAMILY Heme-dependent peroxidases 28 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 Gene3D Peroxidase, domain 2 163 304 - -
Vvi16g566 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PANTHER PEROXIDASE 25-RELATED 9 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vvi16g566 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 Gene3D - 31 323 - -
Vvi16g566 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi16g566 323 PANTHER PEROXIDASE 66 9 322 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g566 K00430 - vvi:100258717 625.935