Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g610 | ATGGGATATCTGTGGTATGCTTTTGCTTTCACAGCGACCTTACTTGTATGTATTACACATTGGGTTTACAGTTTTAGGAAGCCCAAGTTCAATGGAAAGCTCCCTCCGGGTTCAATGGGCTTGCCAATTCTCGGAGAGACTCTTCAGTTCTTTGCTCCCAATACCGCTCTAGATGTCGCACCTTTCATCAGAGAGAGAATGAACAGGTACGGGCCATTGTTCCGAACAAGTCTGGTGGGCTGGCCACTTGTTATTTCCACTGACCCAGACCTCAGCCGCTTCATCCTCCAACAGGAGGGGAAGCTGGTTCACAGCTGGTACACAGAAAGTTTTGACAATGTGGTAGGCAAGCAGAATGTGCTTTCAGCTAAAGGGGCTATGCACAAGTGCCTCAGAAACTTGATTTTGAATCAATTTGGCTCTGAAAGCCTAAAAACAAGGTTTCTTACTCAAGTTGAAGAGTTGGTGCTGAAACATCTGCAGTTGTGGTCTAACTGTACCTCTGTGGAGTTGAAAGAAGCCATTGCTTCTATGATATTTGGGTTTACTGCTAAAAAGCTGTTTGACTATGATGAGTCAAGGACCCCAGAGAAGCTGAGAGAGAACTACGCTGCTTTTCTCGATGGTTTGATCTCATTCCCTCTGAAAATCCCTGGAACTTCTTATTGGAAATGTCTACAGGGTCGTAAAAGGGCAATGAAAACAATAAGAAATATGTTGGATGAGAGGCGTGCATCACCTGAAAGGGAAGACAAAGATTACATTGATTTTGTCCTAGAAGAGATGCAGAAGGATCAAACCATCCTAACCGAGGAAATCGTTTTGGATTTACTCTTTGCACTTCCTTTTGCTACTTATGAAACCACTTCCTCGGCTCTTGTATTAGCCATTCAGTATCTTGGTAGCCATCCTTCAGCATTAGCAGAGATAACAAAAGAGCACGAGTCAATTCTAAGGAGCAGAGAAAGAGTGGATTCTGGAATCACATGGAATGAGTATAAATCCATGAATTTCACGATGATGGTTATCAATGAAACTGTTAGACTTGGAAATATCGTCCCTGGAATTTTCAGGAAAGTGGCAAAAGACATTGAAATAAAGGGGTATACAATTCCAGCAGGGTGGATGGTTATGATCTCCCCTCCAGCTGTCCATTTCAACCCCACTCTGTACAAGGACCCCCTTGTCTTCAATCCATGGCGATGGCAGTGCCAAGAACCAAATGCAGGGTCAAGAAATTTCATGGGCTTTGGTGGAGGAATAAGACAATGTGTGGGAGCTGAGTTTGTGAAACTTCAAATGGCCATTTTTCTCCACCATCTGCTTACAAAATACAGGTGGACAGTGATCAAGGGAGGAGACACCGTTTGGAAGCCAGGACTTGTGTTTCCAAAAGGTTTTCACGTTCAAATATCTGAGAGAACCAAGTTTATATATTTATTATTAAATTACATTAAATATTTTTTCATAATAATATTATGA | 1482 | 42.31 | MGYLWYAFAFTATLLVCITHWVYSFRKPKFNGKLPPGSMGLPILGETLQFFAPNTALDVAPFIRERMNRYGPLFRTSLVGWPLVISTDPDLSRFILQQEGKLVHSWYTESFDNVVGKQNVLSAKGAMHKCLRNLILNQFGSESLKTRFLTQVEELVLKHLQLWSNCTSVELKEAIASMIFGFTAKKLFDYDESRTPEKLRENYAAFLDGLISFPLKIPGTSYWKCLQGRKRAMKTIRNMLDERRASPEREDKDYIDFVLEEMQKDQTILTEEIVLDLLFALPFATYETTSSALVLAIQYLGSHPSALAEITKEHESILRSRERVDSGITWNEYKSMNFTMMVINETVRLGNIVPGIFRKVAKDIEIKGYTIPAGWMVMISPPAVHFNPTLYKDPLVFNPWRWQCQEPNAGSRNFMGFGGGIRQCVGAEFVKLQMAIFLHHLLTKYRWTVIKGGDTVWKPGLVFPKGFHVQISERTKFIYLLLNYIKYFFIIIL* | 494 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 16088471 | 16095546 | + | Vvi16g610 | Vvi16g610 | 778259 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g610 | 493 | Gene3D | Cytochrome P450 | 26 | 472 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | P450 superfamily signature | 284 | 301 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | P450 superfamily signature | 341 | 352 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | P450 superfamily signature | 415 | 424 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | P450 superfamily signature | 424 | 435 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | Pfam | Cytochrome P450 | 35 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 174 | 192 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 293 | 319 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 414 | 424 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PRINTS | E-class P450 group I signature | 424 | 447 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 417 | 426 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi16g610 | 493 | SUPERFAMILY | Cytochrome P450 | 31 | 472 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi16g610 | 493 | PANTHER | P450, PUTATIVE-RELATED | 10 | 473 | - | - | |
Vvi16g610 | 493 | PANTHER | CYTOCHROME P450 26 | 10 | 473 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g610 | - | - | vvi:100253786 | 974.541 |