Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g610 ATGGGATATCTGTGGTATGCTTTTGCTTTCACAGCGACCTTACTTGTATGTATTACACATTGGGTTTACAGTTTTAGGAAGCCCAAGTTCAATGGAAAGCTCCCTCCGGGTTCAATGGGCTTGCCAATTCTCGGAGAGACTCTTCAGTTCTTTGCTCCCAATACCGCTCTAGATGTCGCACCTTTCATCAGAGAGAGAATGAACAGGTACGGGCCATTGTTCCGAACAAGTCTGGTGGGCTGGCCACTTGTTATTTCCACTGACCCAGACCTCAGCCGCTTCATCCTCCAACAGGAGGGGAAGCTGGTTCACAGCTGGTACACAGAAAGTTTTGACAATGTGGTAGGCAAGCAGAATGTGCTTTCAGCTAAAGGGGCTATGCACAAGTGCCTCAGAAACTTGATTTTGAATCAATTTGGCTCTGAAAGCCTAAAAACAAGGTTTCTTACTCAAGTTGAAGAGTTGGTGCTGAAACATCTGCAGTTGTGGTCTAACTGTACCTCTGTGGAGTTGAAAGAAGCCATTGCTTCTATGATATTTGGGTTTACTGCTAAAAAGCTGTTTGACTATGATGAGTCAAGGACCCCAGAGAAGCTGAGAGAGAACTACGCTGCTTTTCTCGATGGTTTGATCTCATTCCCTCTGAAAATCCCTGGAACTTCTTATTGGAAATGTCTACAGGGTCGTAAAAGGGCAATGAAAACAATAAGAAATATGTTGGATGAGAGGCGTGCATCACCTGAAAGGGAAGACAAAGATTACATTGATTTTGTCCTAGAAGAGATGCAGAAGGATCAAACCATCCTAACCGAGGAAATCGTTTTGGATTTACTCTTTGCACTTCCTTTTGCTACTTATGAAACCACTTCCTCGGCTCTTGTATTAGCCATTCAGTATCTTGGTAGCCATCCTTCAGCATTAGCAGAGATAACAAAAGAGCACGAGTCAATTCTAAGGAGCAGAGAAAGAGTGGATTCTGGAATCACATGGAATGAGTATAAATCCATGAATTTCACGATGATGGTTATCAATGAAACTGTTAGACTTGGAAATATCGTCCCTGGAATTTTCAGGAAAGTGGCAAAAGACATTGAAATAAAGGGGTATACAATTCCAGCAGGGTGGATGGTTATGATCTCCCCTCCAGCTGTCCATTTCAACCCCACTCTGTACAAGGACCCCCTTGTCTTCAATCCATGGCGATGGCAGTGCCAAGAACCAAATGCAGGGTCAAGAAATTTCATGGGCTTTGGTGGAGGAATAAGACAATGTGTGGGAGCTGAGTTTGTGAAACTTCAAATGGCCATTTTTCTCCACCATCTGCTTACAAAATACAGGTGGACAGTGATCAAGGGAGGAGACACCGTTTGGAAGCCAGGACTTGTGTTTCCAAAAGGTTTTCACGTTCAAATATCTGAGAGAACCAAGTTTATATATTTATTATTAAATTACATTAAATATTTTTTCATAATAATATTATGA 1482 42.31 MGYLWYAFAFTATLLVCITHWVYSFRKPKFNGKLPPGSMGLPILGETLQFFAPNTALDVAPFIRERMNRYGPLFRTSLVGWPLVISTDPDLSRFILQQEGKLVHSWYTESFDNVVGKQNVLSAKGAMHKCLRNLILNQFGSESLKTRFLTQVEELVLKHLQLWSNCTSVELKEAIASMIFGFTAKKLFDYDESRTPEKLRENYAAFLDGLISFPLKIPGTSYWKCLQGRKRAMKTIRNMLDERRASPEREDKDYIDFVLEEMQKDQTILTEEIVLDLLFALPFATYETTSSALVLAIQYLGSHPSALAEITKEHESILRSRERVDSGITWNEYKSMNFTMMVINETVRLGNIVPGIFRKVAKDIEIKGYTIPAGWMVMISPPAVHFNPTLYKDPLVFNPWRWQCQEPNAGSRNFMGFGGGIRQCVGAEFVKLQMAIFLHHLLTKYRWTVIKGGDTVWKPGLVFPKGFHVQISERTKFIYLLLNYIKYFFIIIL* 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 16088471 16095546 + Vvi16g610 Vvi16g610 778259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g610 493 Gene3D Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 Pfam Cytochrome P450 35 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Vvi16g610 493 SUPERFAMILY Cytochrome P450 31 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g610 493 PANTHER P450, PUTATIVE-RELATED 10 473 - -
Vvi16g610 493 PANTHER CYTOCHROME P450 26 10 473 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g557 Vvi16g610 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g610 - - vvi:100253786 974.541