Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g611 ATGGAATATTTGGGGTATGTGTTTGTAGGAATAGTGACTCTTTTGCTTGTATGCATTCCACATTGGCTTCGCAGTTGGAGGAAGCCCCAGTGCAATGGAAAGCTCCCACCAGGTTCAATGGGATGGCCAATTCTTGGAGAGACCCTTCAGTTTTCGACTCCTTATACTAACCGCGGTGTCTCGCCTTTCATCAGAAAGAGAATGGACAGGTATGGGCCATTGTTCCGGACAAAACTGCTGGGGTGGCCATTTGTTATTTCAGCTGATCCAGACGTGAGCCGCTTCGTCCTCCAACAAGAAGGGAAATTGTTTCACTGCTGGTACATGGAAAGCTTTGACAATCTCTTCGGCCCACAGAATGTGCTTTCATCACAAGGGGCTCTGCACAAGTGCTTAAGAAGCCTGATTTTGAGTCAATTTGGGTCCGAAAGCCTAAGAACTAGGGTTCTTTCTCAAGTTGAAGAGTTGGTGCTGAAAAAACTGCAGTTGTGGTCCAACCATACCTCTGTGGATCTGAAAGAGGGCATTACTTCGATGATGTTTGATTTTACCGCTAAAATGATTTGCAATTACGATGAGTCGAAGACACCAGAGAAGCTGAGAGAGAACTATTCTGCTTTTCTCAGTGGTTTGATCTCCTTCCCTCTGAACATTCCTGGAACTTCTTACTGGAAATGCCTAAAGGGTCGTGAAAGGGCAAGGAAAACACTAAGGAATAGGTTGCTTGAGAGGCTAGCATCCCCGGAAAGGGAGCACAAGGATATCATGGATTTTATTATACAGGAAATGAAGAAGGATGACACTATCCTAACTGAGGAAATCGCTGTGGATTTACTCTTTGGGCTTCCTTTTGGTGCTAATGAAACCACTTCCTCTACTCTTATATTAGCCGTTCAATATCTTGGTAGTCATCCTTCGGCATTAGCAGAGATAACAAGAGAGCATGAGTCGATTCTAAGGAACCGAAAACAAAAGGACTCTGGAATCACATGGGAAGAGTATAAATCCATGAGCTTTACCATGATGGTTGTCAATGAAACTGTTAGGATGGGAAGTATTCTCCCTTCAATTTTCAGGAAAGTGGACAAAGATATTGAAATAAAGGGGTACACGATTCCAGCTGGGTGGATGGTTCTGGTCTCTCCTCCAGCAGCCCATTTCAACCCCAATGTACACAAGGATCCCCATGTCTTCAACCCATGGCGATGGCAGGGTCAAGAACCGACTTCAGGTTCGAATGCTTTGATGGGTTTTGGTGGAGGAATCAAACTTTGTGCGGGAGTTGACTTTGCCAAACTTGAAATCGCCATTTTCCTACACCATCTGGTCACAAAATACAGGTGGGAGGTGATCAAGGGAGGAGAAGTTGTTTGGCGGCAGTCAACTGGACCCATTTTTCCAAACGGTTTTCACGTTCGAATATCTGAGAAAACTAAGTGA 1440 44.79 MEYLGYVFVGIVTLLLVCIPHWLRSWRKPQCNGKLPPGSMGWPILGETLQFSTPYTNRGVSPFIRKRMDRYGPLFRTKLLGWPFVISADPDVSRFVLQQEGKLFHCWYMESFDNLFGPQNVLSSQGALHKCLRSLILSQFGSESLRTRVLSQVEELVLKKLQLWSNHTSVDLKEGITSMMFDFTAKMICNYDESKTPEKLRENYSAFLSGLISFPLNIPGTSYWKCLKGRERARKTLRNRLLERLASPEREHKDIMDFIIQEMKKDDTILTEEIAVDLLFGLPFGANETTSSTLILAVQYLGSHPSALAEITREHESILRNRKQKDSGITWEEYKSMSFTMMVVNETVRMGSILPSIFRKVDKDIEIKGYTIPAGWMVLVSPPAAHFNPNVHKDPHVFNPWRWQGQEPTSGSNALMGFGGGIKLCAGVDFAKLEIAIFLHHLVTKYRWEVIKGGEVVWRQSTGPIFPNGFHVRISEKTK* 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 16096084 16099561 + Vvi16g611 Vvi16g611 778260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g611 479 PANTHER P450, PUTATIVE-RELATED 9 463 - -
Vvi16g611 479 PANTHER CYTOCHROME P450 26 9 463 - -
Vvi16g611 479 Pfam Cytochrome P450 36 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Vvi16g611 479 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS E-class P450 group IV signature 337 353 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS E-class P450 group IV signature 409 425 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS E-class P450 group IV signature 425 443 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi16g611 479 SUPERFAMILY Cytochrome P450 33 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi15g558 Vvi16g611 ECH
Vvi2g371 Vvi16g611 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g611 - - vvi:100258933 985.711