Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g662 ATGGCCATCGGAGGAAAGGCAGTGCCCTTAAGCTTTGTGGCACATGCCCTAGCGGTTGCAGGAGCGGTTATGGTGCTGGTCTGGTGCATCTACTTCCTGGGCGGCCTCGCCTGGGAAGCCACCAACAAGGCTCTCATCTTCAACCTTCATCCAGTTCTGATGCTAATTGGCTTAGTTATCATAGGAGGCCAAGCTATCATGAGTTATAAATCCCTTCCATTGAGAAAAGAGGTGAAGAAGGTCATACATCTCGTCCTCCATGCCATCGCATTGATCCTCGGAATCATCGGTATCTATGCTGCCTTCAAAAACCATAACGAGAGTGGTATCGCCAATCTATACAGCCTCCACTCCTGGCTTGGAATCGTCCTTATCTCACTCTATGGCATTCAGTGGATATACGGGTTTTTAGTATTCTTCTACCCAGGAGGCACGCTTGGTCTGAGAAGTGCGTCGTTGCCATGGCACGTACTGTTTGGGCTACTGGTGTATGTGCTGGTAGTTGGTAACGCTGAGCTAGGGTTTTTAGAGAAGCTGACGTTCCTTGAGAGTTCGGGTCTGGCTAAGTATGGGGCAGAGGCCTTGCTGGTGAACTTCACTGCTATTGTTACAATATTGTATGGCGTTTTTGTAGTGATGACTGCTCTTTCTCAGCCGCCGCCGGAAGAGGACTACGGTTACTCGGCTATATAG 693 49.49 MAIGGKAVPLSFVAHALAVAGAVMVLVWCIYFLGGLAWEATNKALIFNLHPVLMLIGLVIIGGQAIMSYKSLPLRKEVKKVIHLVLHAIALILGIIGIYAAFKNHNESGIANLYSLHSWLGIVLISLYGIQWIYGFLVFFYPGGTLGLRSASLPWHVLFGLLVYVLVVGNAELGFLEKLTFLESSGLAKYGAEALLVNFTAIVTILYGVFVVMTALSQPPPEEDYGYSAI* 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 16936319 16939272 - Vvi16g662 Vvi16g662 778311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g662 230 CDD Cyt_b561_ACYB-1_like 40 183 - -
Vvi16g662 230 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 230 - -
Vvi16g662 230 PANTHER CYTOCHROME B561-RELATED 1 230 IPR043205 GO:0016491
Vvi16g662 230 SMART 561_7 49 175 IPR006593 -
Vvi16g662 230 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Vvi16g662 230 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Vvi16g662 230 Gene3D - 4 224 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g662 K08360 - vvi:100255839 412.535