Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g695 ATGAATACATATTGCCCAGGCTTTGTACAAGTCAATAGTAAAATCCCATTGAGTATTAATTTTGACCAAGTGTCCACAGTTAATGGAACTCAGTATGATTATCCCATCACTATTTTTCAGGACCAATCAACCCTGGATTGGTGGCTTATAGCCGGTCCAAACATTACTGCTATTGGTTATTGGCCGAAGGAACTTTTCCCCTTCCTGAAGATGGTTGCTATACATGTAGAATGGGGAGGGTATCTGTATAAGGATGATGCAACCTCGACCACAGCTCCACAAATGGGCTCCGGGCTATTCCCTGAGCAAGGATACGGCAAGGCTGCGTACTTCAAACAAATTCAAATTGTTCAAGGGGAAGGCGGATTCGTGGATCCACCTGCAGATTCTGTGAACTTATTTTCAGACAGACCTCAGTGCTATAAGGTTGGACCTAGTGCAGAACTGTTATTTTACACAGGATATCACTTCTACTATGGAGGCCCTGGGGGAGATAATAACAGTAGATTTGTTGATTTCTTTTTCCTACTTGTGCAGACAGAATATGGTGACATTTTCGATTGCGTTGACATCAACAAACAACCAGCATTAGATCATCCTTTGCTCAAGAATCACAGAGTCCAAAAGAAACCAAGTGTCTTTCCCAAAGGATTAGGGCCTAAAACTTCAGCCAAGACTCAAAGTTCAAAAATTGGCCTTCCAGATGGAGGGTGCCCAGAAGGGACAGTGCCCATCAAAAGGATCACGAAAAGAGACCTACTATGGATGAAGTCCCTAAAAAGAAACACTACAAAATTCCATCCAATGGATGCAAACACTCCTGGTTATCATCAAGTATTCACCAGACAGTATCCGAGTAAATATTATGGAGCTCAAGGGGGCTTATCCCTACACAGTGAACCCGCTGCAAATCATCAGTCACACCGAGCCATGATAACTGTTTCAGGTGGTTCACCTGATAAATTGAATGCGATACAAGTTGGATGGATGGTTGATAATTTCGTTAATACAGGTTGCCGGGACCTCTTCTGTCCCGGGTACGTACAAGTTGACTCATCTGTGGCTCCAGGCATGACTTTCTACAATCTTTCTACCGTTGATGGACCTCAATTTGACTACTATTTTGTGATTTTACAGATGAATGCAACAGATGAGAATTGGTGGCTTATGAGTTTGGGGGATGAAACGAGAACAATTGGTTACTGGCCTCAAGCCCTATTTCCGGATATGAAGGAGAGCTTTACCAACCTAGAATGGGGTGGGTATGTATTCAATGACGACCCTAAAACCACGACATCTCCTCAAATGGGTTCAGGGCATTTCCCGGAGGAAGGATACGGCAAAGCAGCTTACTTCAGAGATATCAAACTCATGAGAGACCCACAGGAGGGATTTGCAATTGTATCTACGGAAGAAGTGGAGGGAGGAAGGGCTACTTCTATTTCTAAAGAAGAAGATTTGGAGCTGGAAAGAGAATTAAGGCGTCTGAACAAGCCAACCATCAAGAGCTTCCATGCACACAACTCTTTTCTTGAATTTTACATGCTTTATATTTTGCCTTTAATCTCTACAGAATATGGTGACATTTTCGATTGCGTTGACATCAACAAACAACCAGCATTAGATCATCCTTTGCTCAAGAATCACAGAGTCCAAAATCCGAGCACATATTGTGGAGCTCAAGGGGGATTATCCCTGCACAGTGAACCCGCTGCAAACCATCGGTCACACCGAGCCATGATAACTGTTTCAGGCGGTTCACCTGATAAATTGAATGCCATACAAGTTGGATGGACGGCTGATAATTTCGTTAATACAGGTTGTCGGGACCTCCTCTGTCCCGGGTTCGTACAAGTTGACGCATCTATGGCCCCAGGGATGACTTTCTCCGATCTTTCTACCGTTGATGGACCCCAATTTGACTACAATTTCGCGATTTTAAAGATTTATCAGTGTTGGCCCGTCCATTATCATCTGATATATCTCATGGTTAATTTTATGATGATGCAGATGAATGCAACAGATCGGAATTGGTGGTTTATGAGTTTGGGGGCTGAAACGAGAACAATTGGTTACTGGCCTCAAGCCCTATTTCCGAATATGATCGAGAGCTTTCCCAACATAGAATGGGGTGGAAACACAGCTTTTGGATTTGACACTCTATCTACAGAAGAACCATCAGCACGTAAGCCCCGGCATTGGGCTTCCGGAAGAGCTGGGAAGAGGGGGCGGCGACTACAGCTGGGGAGCGAGAATTGCGCAGGGACAGGATCTGGGAGGGGGACAGAATATGGTGACATTTTCGATTGCGTTGACATCAACAAACAACCAGCATTAGATCATCCTTTGCTCAAGAATCACAAAGTCCAACAAGCATACACCAGACAGTCTCCGGGTACATATTACGGAGCTCAAGGGGGAATATCCCTGCACAAGGAACCTGCTACAGACGATCAGTCACACCGATCCGTGATAACTGTTTCAGGTGGTTCACCTGATAAATTGAATGCCATACAAGTTGGATGGACGGCCGATAACTTTGGTAAAACAGGTTGCAGGGACCTTCTGTGTCCTGGGTTCGTACAAGTTGATAAATCTGTGGCTCCAGGCATGGTTTTCCAGCAACTTTCTACCATTGATGGAGCTCAACATGACTACTACTTCTCCATTTTCCAGAATAACAGCACGGATGAGAATTGGTGGCTTATGGGTTGGCCAGAAAAGAAAATAATAGGTTACTGGCCTAAAACCCTATTTCCAGATATGAAGGAGAGCTTTACCAGCCTAGAATGGGGAGGGTATGTACAAGTGAAGGACCCGAATACAAAGGAATATCCTCAAATGGGTTCAGGAGTTTTCCCGGAGGAAGGATATGGCAAAGCAGCATACTTCAAATTTATTAAACTCGTGAAGAATTCAGCAGGCGAATTTCAAGATGTTTCTCCCAAAGAAGTGGTCACCTTCAATGATCGACCAACTTGCTATAGAGTTGGACCAAAGGCAGAGTTACTATACTGGCCTGGATATCATTTTTTCTATGGAGGGCCTGGAGGAAATTGTGGCCATTGA 3069 44.25 MNTYCPGFVQVNSKIPLSINFDQVSTVNGTQYDYPITIFQDQSTLDWWLIAGPNITAIGYWPKELFPFLKMVAIHVEWGGYLYKDDATSTTAPQMGSGLFPEQGYGKAAYFKQIQIVQGEGGFVDPPADSVNLFSDRPQCYKVGPSAELLFYTGYHFYYGGPGGDNNSRFVDFFFLLVQTEYGDIFDCVDINKQPALDHPLLKNHRVQKKPSVFPKGLGPKTSAKTQSSKIGLPDGGCPEGTVPIKRITKRDLLWMKSLKRNTTKFHPMDANTPGYHQVFTRQYPSKYYGAQGGLSLHSEPAANHQSHRAMITVSGGSPDKLNAIQVGWMVDNFVNTGCRDLFCPGYVQVDSSVAPGMTFYNLSTVDGPQFDYYFVILQMNATDENWWLMSLGDETRTIGYWPQALFPDMKESFTNLEWGGYVFNDDPKTTTSPQMGSGHFPEEGYGKAAYFRDIKLMRDPQEGFAIVSTEEVEGGRATSISKEEDLELERELRRLNKPTIKSFHAHNSFLEFYMLYILPLISTEYGDIFDCVDINKQPALDHPLLKNHRVQNPSTYCGAQGGLSLHSEPAANHRSHRAMITVSGGSPDKLNAIQVGWTADNFVNTGCRDLLCPGFVQVDASMAPGMTFSDLSTVDGPQFDYNFAILKIYQCWPVHYHLIYLMVNFMMMQMNATDRNWWFMSLGAETRTIGYWPQALFPNMIESFPNIEWGGNTAFGFDTLSTEEPSARKPRHWASGRAGKRGRRLQLGSENCAGTGSGRGTEYGDIFDCVDINKQPALDHPLLKNHKVQQAYTRQSPGTYYGAQGGISLHKEPATDDQSHRSVITVSGGSPDKLNAIQVGWTADNFGKTGCRDLLCPGFVQVDKSVAPGMVFQQLSTIDGAQHDYYFSIFQNNSTDENWWLMGWPEKKIIGYWPKTLFPDMKESFTSLEWGGYVQVKDPNTKEYPQMGSGVFPEEGYGKAAYFKFIKLVKNSAGEFQDVSPKEVVTFNDRPTCYRVGPKAELLYWPGYHFFYGGPGGNCGH* 1023
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 17278297 17309401 - Vvi16g695 Vvi16g695 778344

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g695 1022 MobiDBLite consensus disorder prediction 212 236 - -
Vvi16g695 1022 Pfam Neprosin 325 461 IPR004314 -
Vvi16g695 1022 Pfam Neprosin 594 714 IPR004314 -
Vvi16g695 1022 Pfam Neprosin 838 1016 IPR004314 -
Vvi16g695 1022 Pfam Neprosin 1 162 IPR004314 -
Vvi16g695 1022 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 2 163 - -
Vvi16g695 1022 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 524 715 - -
Vvi16g695 1022 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 180 460 - -
Vvi16g695 1022 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 763 1017 - -
Vvi16g695 1022 Pfam Neprosin activation peptide 178 269 IPR025521 -
Vvi16g695 1022 Pfam Neprosin activation peptide 762 797 IPR025521 -
Vvi16g695 1022 Pfam Neprosin activation peptide 522 558 IPR025521 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g695 - - - vvi:104882224 615.92
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g695 . . . . . . . . . . . . . . . . . . . . . . . . Cla01g00257 Cam01g0264 Cec01g0255 Cco01g0270 Clacu01g0263 Cmu01g0252 Cre09g2257 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0070965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1