Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g704 ATGAGAGTGGCGGCGTACGTTAGCGCGGTCATGCTAACGTGCGCGTGGTGCGTATTGTCGGAGCCGAGGCTGGAGGTGCCGATGACTCTGGTTCGGAATGCTTCTCATCAGGGAGCTTTTTGCTTAGACGGGAGCTTGCCGGCGTATCATCTGCATAAAGGATTCGGAGCTGGAGCTACCAACTGGCTTTTGCAGTTTGAGGGAGGTGGGTGGTGCAATGATTTAGAATCATGCTTCGAGAGAGCCGGTACTCGTCGTGGATCAACTCGTTACATGTCCAAGTTTGAGGTCTTTTCTGGAATTTTAAGCAATAATGCATCTCTAAATCCAGATTTTTACAATTGGAACCGGGTGAAGCTAAGATATTGTGATGGAGCCTCATTTGCTGGGGATGCCAAGTTTGACAATGGGACCTCAATACTCTACTTTAGAGGGCAGAAGATTTGGCGAGCAATAATTAATGATCTTCTCCCTAAAGGATTAAGCAAAGCAAAGAAGGCTTTACTTTCAGGTTGCTCTGCTGGAGGTCTAGCATCTTTTTTGCATTGTGACAACTTTACCAGCTTTCTACCACAAAATGCCAGTGTAAAATGCTTGAGTGATGCTGGATTTTTTCTTGATGAAAAAGACATAAGCTTGAACCACTCTATGAGGGCCTTCTATGAAGAACTCATTTCCCTGCAGGGGGTTGAAAAGAATCTACATGAAAACTGCACAAGTTCTCTCCATTATCCACATCTATGCCTCTTCCCACAGTATGCTTTGGAATTCATTAAGACACCCTTTTTTATCTTAAACTCAGCATATGATGTGTACCAATTTCATCATATATTGGTGCCACCTACTGCTGATTTGCATGGACGTTGGAATCGTTGCAAGCTAGATCCTGCGGCATGCAATCCAAACCAGCTAAGTATTTTGCAAGGTTTTAGGAAAGATATGCTTACAGCTTTGAACCAATTCTATACTTATTCAAGAAGAGGAGGGATGTTTATAAATTCATGCTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGCTGGCAATTGACTCCCCAAGGGTGAACAATAAGACTATCGCAGAAGCAATTGGTGACTGGTACTTTAGCAGAAGGATAACTAAAGAGATTGACTGTGCATATCCTTGTGACACCACTTGTCATAATCTTATACCATTGCCTTAG 1185 43.29 MRVAAYVSAVMLTCAWCVLSEPRLEVPMTLVRNASHQGAFCLDGSLPAYHLHKGFGAGATNWLLQFEGGGWCNDLESCFERAGTRRGSTRYMSKFEVFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDAKFDNGTSILYFRGQKIWRAIINDLLPKGLSKAKKALLSGCSAGGLASFLHCDNFTSFLPQNASVKCLSDAGFFLDEKDISLNHSMRAFYEELISLQGVEKNLHENCTSSLHYPHLCLFPQYALEFIKTPFFILNSAYDVYQFHHILVPPTADLHGRWNRCKLDPAACNPNQLSILQGFRKDMLTALNQFYTYSRRGGMFINSCFAHCQSESQDTWLAIDSPRVNNKTIAEAIGDWYFSRRITKEIDCAYPCDTTCHNLIPLP* 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 17512818 17521780 - Vvi16g704 Vvi16g704 778353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g704 394 PANTHER PECTIN ACETYLESTERASE 9 18 392 - -
Vvi16g704 394 PANTHER NOTUM-RELATED 18 392 IPR004963 GO:0016787
Vvi16g704 394 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g704 K19882 - vvi:100247339 818.535