Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g731 ATGAAGAAAAAACAAGAGGAAAGTGCTTTAGAAAAGTTGAGCAGTTGGTACCAAGATGGAGAATTGGAGAACAAGCAAGATGGTGGAGATAAGGCAGGAAGTAGAGGGCATGGTCGAGCTGATGAAGGTGAGAGAAGGAAAATGGCCTCAAAGTTTGCTGACCATGAGGGTTCCCAGAGAAGTAAAAGCAAAGAAGAAAAATCTCGTGATGGAGAGCTTGAAAAAGTAATGGAGAGAGATTCCAGGCATTCAGACAGGAAAGAAACCAACCGAGAGAAAGGCCATGGATCTTCTGATCAGGTGAGAAACCCAAGGAGAAGATGGGATGATGCAGATTCTGTTGTGAAAGGGGAAGAAAGTAATTATGAAAAAGCTGATTTGAGAAAAGATAATAAAGCAAGTCCTCTGGCTCGTGAAGATCGATCTGGCAGGGAGAAAAATGAGAAGCACAGACAGCAGCGGACTCCCACTGGTCGCGATGTTGCTGAAAACCGGGAAAGGTCTTTCAATACTGATGAGGATGGAAGTGTATGGATGAGAGACAAAAGTGGGAGAGAAGTTGGGCACTCTAACAGGTCAAGAACACCTGAGAGGAGTGGGAGACGACATCAAGGATCAGAGAACTATGAGACTGACTATGAAAGAAGTGATAGCTGGGGTGACAGGAACAGGGATCGAGAAGGTTCCAAAGAGAGTTGGAAAAGAAGGCAACCCAGCAGTAACGATAAAGAGACAAAAGAAGGGGATGTTGTGTATGATCATGGAAGAGACTGGGAGTTACCAAGACATGCTCGGGATAGGACTGATGGGCGTTCTGGAAACAGGAAAGATGGGAGCAGGGGTGAAGCTGTGAAAACGTCATCAAATTTTGGAATTGCTAGTGAGAATTATGATGTGATAGAGATTCAAACCAAGCCTCTTGATTATGGAAGAGCTGACATGGGATCCAACTTTGGCAGGAGAACTGAAGGTGGTCCTACATCTGACATGAAATCAGCACCAAATGCTGAGGAGTGGGCATATATGCGGGAGGACAGGGCAAGAAGGACTGATGACATTGACATTCAGGGAGGGAAAGGAAGAGGTCAGAAAGGTGCTATGTCTGGTCGTGCTGCTGGTGGCCAAAGTTCTAGTAGTGGGAATAGGGTTGGGAGAGGAGGAAGAGGTAGGCCTACTGGGAGAGACAACCAACAGGTTGGAATCCCATTGCCTTTAATGGGATCACCTTTTGGACCTCTTGGAATGCCGCCACCTGGACCAATGCAGCAACTTAACCCTAGTATGTCTCCTGCTCCAGGGCCTCCAATTTCGCCTGGTGTCTTTATTCCACCATTTTCTCCACCTGTTGTTTGGCCTGGAGCGCGAGCTGTTGATATGAATATGTTAGCTGTTCCACCTGGTCTCTCTTCTGTTCCTCCTGGACCATCAGGTCCGAGGTTTTCTCCTAACATAGGAACTCCACCAAGTCCTGCCATGTACTTTAATCAGCCAGGCCCTGGAAGGGGGCTGCCTCCAAGCATATCTGGCCCTGGTTTTAATGCTTCAGGATCAGTAGGACGTGGACAGTCACATGATAAAGCCCCTGGGGGTTGGGTTCCTCCTAGATCTGGTGGACCTCCTGGTAAAGCTCCTTCAAGAGGAGACCAGAATGATTACTCTCAGAATTTTGTTGACACAGGTATGCGGCCACAGAATTTCATCAGGGAGCTAGAGCTTACTAATGTTGTGGAGGACTACCCCAAACTTCGTGAACTCATACAGAAGAAAGATGAGATTGTTGCTAAATCTGCTTCTCCTCCCATGTACTACAAGTGTGATTTACGGGAGCATGCCCTGTCACCAGAGTTCTTTGGAACTAAGTTCGATGTCATTCTTGTGGACCCCCCTTGGGAGGAATATGTTCATCGGGCTCCTGGTGTTGCTGACCATATGGAGTACTGGACCTTTGAAGAAATTTTAAATCTTAAGATTGAGGCGATTGCAGATACACCCTCTTTCATATTTCTTTGGGTGGGTGATGGTGTGGGCCTTGAGCAGGGCCGTCAATGTCTAAAAAAGTGGGGATTTCGAAGGTGTGAAGATATATGTTGGGTAAAGACAAATAAAACTAATGCAACTCCAGGCTTGCGCCATGATTCTCATACTTTGTTTCAGCACTCAAAGGAACACTGCTTGATGGGCATTAAAGGAACTGTTCGTCGGAGTACCGATGGTCATATCATCCATGCCAACATTGACACGGATGTAATTATAGCTGAGGAACCTCCTTATGGTTCAACTGCAAAGCCTGAAGACATGTACCGGATAATTGAGCATTTCTCTCTTGGCCGTCGGAGGCTTGAGCTCTTTGGTGAAGACCACAATATTCGGTCTGGGTGGCTGACTGTTGGTAACGGATTATCCTCATCAAATTTTAATGCTGAGGCATATGTCAGGAATTTTGGTGATAAGGATGGGAAAGTTTGGCAGGGAGGCGGAGGACGAAATCCTCCTCCAGAGGCGCCCCATCTTGTCATGACAACCCCTGAAATAGAGTCTCTTCGACCCAAGTCGCCAATGAAGAACCAGCAGCAACTGCAGCAGCAGCAGTCGACCTCCATTTCTCTGACAACAGCTAATTCATCAAACAAAAGGCCGGCTGGTAACTCACCCCAGAATCCAAATGCTCTGAGTATGAACCAAGAAGCTTCTAGCTCTAACCCATCAACTCCTGCTCCTTGGGCTTCACCAATGGATGCCTTCAAAGGACGGGAGACCGGCAATATGTCTTCAGAGGATAAGGGTGTTGACATTTATGGGTATAACACATCTTTTGGACAGATAAATGGAGACTATTTAGATTTTGAAGTGGTACAAACCAAATTGGAGGCAGCTCGCTATGATTCTGTGGATGCTTCAATGTATAGAGTGGTCTCAAGGTTCCCTCAAACTCAAACACACCATGGTCAAAGGGAGGCAGTTCATGGGAACTGA 2973 46.69 MKKKQEESALEKLSSWYQDGELENKQDGGDKAGSRGHGRADEGERRKMASKFADHEGSQRSKSKEEKSRDGELEKVMERDSRHSDRKETNREKGHGSSDQVRNPRRRWDDADSVVKGEESNYEKADLRKDNKASPLAREDRSGREKNEKHRQQRTPTGRDVAENRERSFNTDEDGSVWMRDKSGREVGHSNRSRTPERSGRRHQGSENYETDYERSDSWGDRNRDREGSKESWKRRQPSSNDKETKEGDVVYDHGRDWELPRHARDRTDGRSGNRKDGSRGEAVKTSSNFGIASENYDVIEIQTKPLDYGRADMGSNFGRRTEGGPTSDMKSAPNAEEWAYMREDRARRTDDIDIQGGKGRGQKGAMSGRAAGGQSSSSGNRVGRGGRGRPTGRDNQQVGIPLPLMGSPFGPLGMPPPGPMQQLNPSMSPAPGPPISPGVFIPPFSPPVVWPGARAVDMNMLAVPPGLSSVPPGPSGPRFSPNIGTPPSPAMYFNQPGPGRGLPPSISGPGFNASGSVGRGQSHDKAPGGWVPPRSGGPPGKAPSRGDQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVAKSASPPMYYKCDLREHALSPEFFGTKFDVILVDPPWEEYVHRAPGVADHMEYWTFEEILNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKTNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTAKPEDMYRIIEHFSLGRRRLELFGEDHNIRSGWLTVGNGLSSSNFNAEAYVRNFGDKDGKVWQGGGGRNPPPEAPHLVMTTPEIESLRPKSPMKNQQQLQQQQSTSISLTTANSSNKRPAGNSPQNPNALSMNQEASSSNPSTPAPWASPMDAFKGRETGNMSSEDKGVDIYGYNTSFGQINGDYLDFEVVQTKLEAARYDSVDASMYRVVSRFPQTQTHHGQREAVHGN* 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 17754300 17767006 - Vvi16g731 Vvi16g731 778380

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g731 990 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 614 757 IPR029063 -
Vvi16g731 990 MobiDBLite consensus disorder prediction 23 282 - -
Vvi16g731 990 MobiDBLite consensus disorder prediction 847 922 - -
Vvi16g731 990 ProSiteProfiles MT-A70-like family profile. 580 819 IPR007757 -
Vvi16g731 990 PANTHER N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14 215 351 - -
Vvi16g731 990 PANTHER N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14 1 218 - -
Vvi16g731 990 PANTHER N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14 377 950 - -
Vvi16g731 990 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 394 990 - -
Vvi16g731 990 MobiDBLite consensus disorder prediction 338 358 - -
Vvi16g731 990 MobiDBLite consensus disorder prediction 470 551 - -
Vvi16g731 990 MobiDBLite consensus disorder prediction 470 485 - -
Vvi16g731 990 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 1 218 IPR045123 -
Vvi16g731 990 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 377 950 IPR045123 -
Vvi16g731 990 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 215 351 IPR045123 -
Vvi16g731 990 MobiDBLite consensus disorder prediction 309 424 - -
Vvi16g731 990 MobiDBLite consensus disorder prediction 409 424 - -
Vvi16g731 990 Pfam MT-A70 621 798 IPR007757 -
Vvi16g731 990 MobiDBLite consensus disorder prediction 1 295 - -
Vvi16g731 990 MobiDBLite consensus disorder prediction 850 906 - -
Vvi16g731 990 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 624 630 IPR002052 GO:0003676|GO:0008168|GO:0032259
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g731 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit - vvi:100254343 1689.86
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Vvi2g254 Vvi16g731 ECH
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g731 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007565 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 1 1 1 36