Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi16g854 | ATGTCTAACAGTCTTGCTGTGCTACATGCCCTTGATTCAGCCAGAACACAATGGTACCACATCACCGCCATCATCATCGCCGGCATGGGCTTCTTCACCGACGCCTATGACCTCTTCTGCATCTCCACCATCTCCAAACTCTTGGGCCGTCTCTACTACTACGACCCTCTCCCCCACAACGTCAATAATGCCGTTGTCGGTGTTGCCCTGTTCGGAACCCTAACAGGACAGTTGGTGTTTGGCTGGTTGGGGGACAAGCTCGGCCGGAAAAGAGTTTATGGCTTCACTCTCATTCTTATGGTTGTTTGTGCTATTTGCTCCGGTCTGTCATTTGGGTATAGCCCAAAAGCTGTAATCATTACACTTTGTTTCTTCAGGTTCTGGCTAGGGTTTGGGATTGGTGGAGACTATCCCCTTTCCGCGACGATCATGTCGGAGTATGCGAATAAAAAGACTCGTGGGGCTTTTATTGCGGCAGTGTTTGCTATGCAGGGCATGGGGATCATTTTTGCGGGGCTGGATCCTGTGCGTTCTACCCAACGTGAGGCGGATTTTCTGTGGCGGATCGTGCTGATGCTCGGAGCCTTGCCGGCACTTTTAACGTACTACTGGAGAATGAAGATGCCGGAAACTGAGTTTAAGGCTGCTAACGAGTACTCATTATGGTCGAGAGAGTTCTTTGATCGCCATGGGCTTCACCTGATAGGCACAATGAGCACCTGGTTCTTGTTGGACATAGCCTTCTACAGCCAAAACCTAACTCAGAAGGATATTTTTCCGGCGATGAACCTGGTAAATAAAGATTATCAAGTCAGTGCACTCCGGGAAATGTTCGAGACATCCAGGGCCATGTTTGTGGTGGCCTTGCTGGGGACTTTTCCGGGATATTGGTTCACAGTTTTCTTCATTGAACGGATTGGCCGATACATCATCCAGCTTGTGGGGTTCTTCATGATGTCCTTATTCATGCTGATCATAGGAATCAAATACGAATACCTCAGGGACGATAATAAATGGCTGTTTGCAGTCCTATATGGGCTGACCTTCTTCTTTGCCAATTTCGGTCCAAACAGCACAACTTTTGTTCTTCCGGCCGAGCTGTTCCCGACCCGAGTGAGATCAACATGCCATGCAATGAGCGCTGCGGCCGGGAAGGCTGGGGCTATGATCGGGGCATTTGTGGTGGCGACCTATACTTTGGATGGTAAAGCTAATGAAATTAGGGTAGCCATGATAACCATGGCCTGTACAAATATGCTAGGGTTCTTCTGTACATTCTTGGTGACGGAGACCAAAGGCCGATCCCTGGAGGAAATATCAGGCGAGGATGGAGTCCGAATACAATGGTACCACATCACCGCCATCATCATCTGCATGGGCTTCTTCACAGACGCCTATGACCTCTTCTGCATCTCCACCGCCTGGCAACCTACCCCACAACGTCAACAATGCTGTTGTAGGGCAGTAGGGGTTGCCCTCGTCGGAACCCTAACAGGACAGCTAGTCTTTGGCTGGCTTGGCAACAAGCTCGGCCGGAAAAGAGTTTATGGCTTCACTCTCATTCTTATGGTTATTTGTGCTATTTGCTCTGGTCTGTCATTTGGACTTGTGGGGCTTTTATTGGCAGTTACCCCATATGAAAATGACTCACAGTTTGAACCAACTGGCAAAAGATCCCTGAGAAACCTAACTCAAAGGGAAGAAATATGTACAATTAAACCCAAATAA | 1728 | 48.73 | MSNSLAVLHALDSARTQWYHITAIIIAGMGFFTDAYDLFCISTISKLLGRLYYYDPLPHNVNNAVVGVALFGTLTGQLVFGWLGDKLGRKRVYGFTLILMVVCAICSGLSFGYSPKAVIITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGMGIIFAGLDPVRSTQREADFLWRIVLMLGALPALLTYYWRMKMPETEFKAANEYSLWSREFFDRHGLHLIGTMSTWFLLDIAFYSQNLTQKDIFPAMNLVNKDYQVSALREMFETSRAMFVVALLGTFPGYWFTVFFIERIGRYIIQLVGFFMMSLFMLIIGIKYEYLRDDNKWLFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHAMSAAAGKAGAMIGAFVVATYTLDGKANEIRVAMITMACTNMLGFFCTFLVTETKGRSLEEISGEDGVRIQWYHITAIIICMGFFTDAYDLFCISTAWQPTPQRQQCCCRAVGVALVGTLTGQLVFGWLGNKLGRKRVYGFTLILMVICAICSGLSFGLVGLLLAVTPYENDSQFEPTGKRSLRNLTQREEICTIKPK* | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 19301910 | 19308719 | + | Vvi16g854 | Vvi16g854 | 778503 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi16g854 | 575 | Pfam | Sugar (and other) transporter | 278 | 440 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Vvi16g854 | 575 | Pfam | Sugar (and other) transporter | 25 | 211 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Vvi16g854 | 575 | Pfam | Sugar (and other) transporter | 486 | 535 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Vvi16g854 | 575 | Gene3D | MFS general substrate transporter like domains | 451 | 544 | IPR036259 | - | |
Vvi16g854 | 575 | Gene3D | MFS general substrate transporter like domains | 19 | 449 | IPR036259 | - | |
Vvi16g854 | 575 | CDD | MFS_PhT | 24 | 432 | - | - | |
Vvi16g854 | 575 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 23 | 433 | IPR020846 | GO:0022857 | |
Vvi16g854 | 575 | SUPERFAMILY | MFS general substrate transporter | 449 | 542 | IPR036259 | - | |
Vvi16g854 | 575 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 3 | 173 | - | - | |
Vvi16g854 | 575 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 212 | 445 | - | - | |
Vvi16g854 | 575 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 446 | 535 | - | - | |
Vvi16g854 | 575 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 179 | 211 | - | - | |
Vvi16g854 | 575 | SUPERFAMILY | MFS general substrate transporter | 11 | 440 | IPR036259 | - | |
Vvi16g854 | 575 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 446 | 535 | - | - | |
Vvi16g854 | 575 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 212 | 445 | - | - | |
Vvi16g854 | 575 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 179 | 211 | - | - | |
Vvi16g854 | 575 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 3 | 173 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi16g854 | K08176 | - | vvi:100258742 | 854.358 |